Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 SNORD115-40-201ENST00000606510 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 MIR302B-201ENST00000362188 73 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-833P-201ENST00000363486 107 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 Y_RNA.241-201ENST00000364470 117 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 MIR488-201ENST00000365739 83 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-424P-201ENST00000384367 105 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 SNORA67.4-201ENST00000384688 142 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 SNORD67-201ENST00000390833 111 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 Z98742.3-201ENST00000418637 326 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 RNU7-6P-201ENST00000516845 62 ntBASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HCN4Q9Y3Q4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HCN4Q9Y3Q4 Y_RNA.93-201ENST00000363066 109 ntBASIC3□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-950P-201ENST00000384651 107 ntBASIC3□□□□□ -1.93
HCN4Q9Y3Q4 RNA5SP144-201ENST00000410846 116 ntBASIC3□□□□□ -1.93
HCN4Q9Y3Q4 SNORA31.4-201ENST00000516049 129 ntBASIC3□□□□□ -1.93
HCN4Q9Y3Q4 RPPH1-2P-201ENST00000516688 293 ntBASIC3□□□□□ -1.93
HCN4Q9Y3Q4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3□□□□□ -1.93
HCN4Q9Y3Q4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3□□□□□ -1.93
HCN4Q9Y3Q4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HCN4Q9Y3Q4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HCN4Q9Y3Q4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
HCN4Q9Y3Q4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 AC007336.1-201ENST00000576365 3828 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 AC093831.2-201ENST00000624393 3427 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 ICE2P2-201ENST00000483823 2787 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 MIR342-201ENST00000362212 99 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-3-201ENST00000363100 82 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 SNORA25.6-201ENST00000364121 118 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 MIR512-1-201ENST00000384913 84 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 SNORA26.2-201ENST00000390922 122 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 AL034345.1-201ENST00000407768 123 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 RNY4P29-201ENST00000410801 97 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 RNA5SP492-201ENST00000411330 114 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 RPL39P25-201ENST00000449384 154 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 IGLV3-17-201ENST00000519099 244 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 AC022202.1-201ENST00000613515 211 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 AC087741.2-201ENST00000619415 172 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
HCN4Q9Y3Q4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 AC073325.2-201ENST00000339545 159 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-816P-201ENST00000390914 107 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 AL022718.1-201ENST00000412004 84 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 SNX2P2-201ENST00000424553 323 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 RNA5SP148-201ENST00000516527 94 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 AC141557.1-201ENST00000540982 400 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 AC021613.1-201ENST00000623880 111 ntBASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
HCN4Q9Y3Q4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 RNU6-661P-201ENST00000362409 107 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 SNORA38-201ENST00000363946 132 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 SNORA63D-201ENST00000364359 132 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 RNU4-16P-201ENST00000364737 141 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 MIR9-1-201ENST00000385198 89 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 U8.16-201ENST00000391279 133 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 MIR1267-201ENST00000408723 78 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 BX510359.4-201ENST00000423750 193 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 RPS23P4-201ENST00000487908 423 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 AC004812.1-201ENST00000540773 146 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 MIR5094-201ENST00000578766 85 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 AL442128.1-201ENST00000615151 90 ntBASIC2.97□□□□□ -1.93
HCN4Q9Y3Q4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 Y_RNA.388-201ENST00000383919 113 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 RNU1-148P-201ENST00000384472 162 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 MIR518E-201ENST00000385252 88 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 RPS3AP1-201ENST00000413190 320 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 AL512326.2-201ENST00000426359 151 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 RNA5SP168-201ENST00000516642 112 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 RNA5SP137-201ENST00000516833 135 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 AC090821.2-201ENST00000523552 176 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 DEFB131E-201ENST00000532329 154 ntBASIC2.96□□□□□ -1.94
HCN4Q9Y3Q4 MIR3126-201ENST00000577443 74 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms