Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC021613.1-201ENST00000623880 111 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
NOD1Q9Y239 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NOD1Q9Y239 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NOD1Q9Y239 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NOD1Q9Y239 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3□□□□□ -1.93
NOD1Q9Y239 MIR590-201ENST00000385008 97 ntBASIC3□□□□□ -1.93
NOD1Q9Y239 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
NOD1Q9Y239 AC093850.1-201ENST00000454121 251 ntBASIC3□□□□□ -1.93
NOD1Q9Y239 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3□□□□□ -1.93
NOD1Q9Y239 RNA5SP437-201ENST00000517249 129 ntBASIC3□□□□□ -1.93
NOD1Q9Y239 SUB1P4-201ENST00000566062 339 ntBASIC3□□□□□ -1.93
NOD1Q9Y239 AL590808.1-201ENST00000618696 141 ntBASIC3□□□□□ -1.93
NOD1Q9Y239 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3□□□□□ -1.93
NOD1Q9Y239 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3□□□□□ -1.93
NOD1Q9Y239 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NOD1Q9Y239 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NOD1Q9Y239 MIR26A1-201ENST00000362205 77 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 SNORA1.2-201ENST00000365189 134 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 RNU1-109P-201ENST00000383960 147 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 RPL39P25-201ENST00000449384 154 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 UBL5P3-201ENST00000475112 231 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 RN7SKP43-201ENST00000516173 320 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 AC004812.1-201ENST00000540773 146 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 AC141557.1-201ENST00000540982 400 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 AL162726.3-218ENST00000636401 95 ntBASIC2.99□□□□□ -1.93
NOD1Q9Y239 AC092881.1-201ENST00000638218 2733 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 Y_RNA.370-201ENST00000365589 108 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 SNORA70B-201ENST00000384210 135 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 MIR136-201ENST00000385207 82 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 MIR887-201ENST00000401258 79 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 RNA5SP293-201ENST00000410527 113 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 SNORA19.1-201ENST00000410656 129 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 RNA5SP501-201ENST00000410990 112 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 AL512326.2-201ENST00000426359 151 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 RNU6-109P-201ENST00000516364 107 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 RNU6-184P-201ENST00000516514 107 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 MIR4709-201ENST00000577272 72 ntBASIC2.98□□□□□ -1.93
NOD1Q9Y239 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NOD1Q9Y239 RNU6-112P-201ENST00000363599 104 ntBASIC2.97□□□□□ -1.93
NOD1Q9Y239 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.97□□□□□ -1.93
NOD1Q9Y239 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.97□□□□□ -1.93
NOD1Q9Y239 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
NOD1Q9Y239 RNU6-970P-201ENST00000516312 107 ntBASIC2.97□□□□□ -1.93
NOD1Q9Y239 AC245166.1-201ENST00000521012 253 ntBASIC2.97□□□□□ -1.93
NOD1Q9Y239 AC021506.2-201ENST00000612354 169 ntBASIC2.97□□□□□ -1.93
NOD1Q9Y239 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
NOD1Q9Y239 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NOD1Q9Y239 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.96□□□□□ -1.94
NOD1Q9Y239 Y_RNA.78-201ENST00000362970 110 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 Y_RNA.531-201ENST00000384589 121 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 RNU6-816P-201ENST00000390914 107 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 RNU6-1268P-201ENST00000391214 107 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 RNU6-1239P-201ENST00000391310 107 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 MIR1912-201ENST00000410389 80 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 RN7SKP192-201ENST00000411291 327 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 RNU7-45P-201ENST00000459460 63 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 SNORD53-201ENST00000579969 78 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 AC064859.1-201ENST00000624741 174 ntBASIC2.96□□□□□ -1.94
NOD1Q9Y239 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
NOD1Q9Y239 MIR148B-201ENST00000362252 99 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 RNU6-1131P-201ENST00000364955 107 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 SNORA70.7-201ENST00000384159 133 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 RNU6-296P-201ENST00000384608 107 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 POLR2J4-204ENST00000418424 324 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.95□□□□□ -1.94
NOD1Q9Y239 RNU7-67P-201ENST00000459003 62 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 snoU13.27-201ENST00000459278 104 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 AC003982.1-202ENST00000469928 248 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 RPS23P4-201ENST00000487908 423 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 RNA5SP24-201ENST00000516478 95 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 RNU6-958P-201ENST00000516995 106 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 Y_RNA.818-201ENST00000618813 71 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 AC087741.2-201ENST00000619415 172 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 AL513423.1-201ENST00000621695 132 ntBASIC2.95□□□□□ -1.94
NOD1Q9Y239 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.95□□□□□ -1.94
NOD1Q9Y239 RNA5SP270-201ENST00000411361 118 ntBASIC2.94□□□□□ -1.94
NOD1Q9Y239 RNU6-904P-201ENST00000516206 101 ntBASIC2.94□□□□□ -1.94
NOD1Q9Y239 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.94□□□□□ -1.94
NOD1Q9Y239 RNA5SP481-201ENST00000516814 122 ntBASIC2.94□□□□□ -1.94
NOD1Q9Y239 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.94□□□□□ -1.94
NOD1Q9Y239 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NOD1Q9Y239 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
NOD1Q9Y239 U8.2-201ENST00000363156 134 ntBASIC2.93□□□□□ -1.94
NOD1Q9Y239 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
NOD1Q9Y239 AL513534.2-201ENST00000603836 250 ntBASIC2.93□□□□□ -1.94
NOD1Q9Y239 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOD1Q9Y239 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU6-294P-201ENST00000364999 102 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 MIR660-201ENST00000385235 97 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU6-1319P-201ENST00000390855 104 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU6-747P-201ENST00000390928 104 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU6-241P-201ENST00000391148 104 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU6-177P-201ENST00000411257 104 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 PGBD4P5-201ENST00000445958 426 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU6-893P-201ENST00000458841 100 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNU7-113P-201ENST00000459273 62 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms