Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SNORD115-3-201ENST00000363100 82 ntBASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 SNORD115-22-201ENST00000364456 82 ntBASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 RNU6-571P-201ENST00000384128 107 ntBASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 AL034345.1-201ENST00000407768 123 ntBASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 EIF4BP1-201ENST00000554881 351 ntBASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCAF1Q9H7N4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 RNA5SP126-201ENST00000365092 109 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 RNA5SP237-201ENST00000410414 113 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 AC006539.3-201ENST00000454258 129 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 CYP3A52P-201ENST00000563326 91 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 MIR8057-201ENST00000620957 69 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 MIR7157-201ENST00000635801 60 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 MIR7515-201ENST00000637837 67 ntBASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAF1Q9H7N4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 RNU6-243P-201ENST00000391140 107 ntBASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 RNA5SP179-201ENST00000517284 121 ntBASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 AC138749.4-201ENST00000563970 127 ntBASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 RNVU1-4-201ENST00000612985 164 ntBASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 MIR7702-201ENST00000621931 59 ntBASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 ZNF209P-201ENST00000593450 2304 ntBASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCAF1Q9H7N4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SCAF1Q9H7N4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SCAF1Q9H7N4 SNORA60-201ENST00000362396 134 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 RNA5SP493-201ENST00000364115 91 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 MIR561-201ENST00000385216 97 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 MIR518E-201ENST00000385252 88 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 RNA5SP120-201ENST00000410900 112 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 AC083863.1-201ENST00000438811 231 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 MIR2113-201ENST00000459007 91 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 MIR5684-201ENST00000585074 65 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 AC069503.3-201ENST00000618674 145 ntBASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SCAF1Q9H7N4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 RNU6-1254P-201ENST00000391266 104 ntBASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 SNORA70.19-201ENST00000516717 90 ntBASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 MIR5047-201ENST00000579212 100 ntBASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 AC091167.4-201ENST00000605079 184 ntBASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 MIR8053-201ENST00000613344 75 ntBASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCAF1Q9H7N4 IPO8P1-201ENST00000455509 3109 ntBASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 Y_RNA.42-201ENST00000362660 108 ntBASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 Y_RNA.207-201ENST00000364142 106 ntBASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 AC025627.2-201ENST00000576220 160 ntBASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 AL109933.3-201ENST00000619095 188 ntBASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCAF1Q9H7N4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 RNU6-466P-201ENST00000391224 103 ntBASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 ATP5A1P2-201ENST00000412323 255 ntBASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 MIR4738-201ENST00000579134 87 ntBASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.55□□□□□ -1.52
SCAF1Q9H7N4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCAF1Q9H7N4 COTL1P1-201ENST00000422309 375 ntBASIC5.54□□□□□ -1.52
SCAF1Q9H7N4 SNORA62.6-201ENST00000606322 83 ntBASIC5.54□□□□□ -1.52
SCAF1Q9H7N4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.54□□□□□ -1.52
SCAF1Q9H7N4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 RNU6-1079P-201ENST00000362861 110 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 SNORD113.1-201ENST00000363280 73 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 RNU6-1051P-201ENST00000365471 102 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 MIR526A1-201ENST00000384897 85 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 SNORA40.6-201ENST00000391153 128 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 MIR1251-201ENST00000408552 70 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 RPL29P14-201ENST00000495837 428 ntBASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SCAF1Q9H7N4 SNORD35B-201ENST00000363660 87 ntBASIC5.52□□□□□ -1.53
SCAF1Q9H7N4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC5.52□□□□□ -1.53
SCAF1Q9H7N4 SNORA11.4-201ENST00000408823 129 ntBASIC5.52□□□□□ -1.53
SCAF1Q9H7N4 AL691482.2-201ENST00000457453 84 ntBASIC5.52□□□□□ -1.53
SCAF1Q9H7N4 U6.109-201ENST00000636749 87 ntBASIC5.52□□□□□ -1.53
SCAF1Q9H7N4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAF1Q9H7N4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC5.51□□□□□ -1.53
SCAF1Q9H7N4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCAF1Q9H7N4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SCAF1Q9H7N4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCAF1Q9H7N4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCAF1Q9H7N4 RNU6-957P-201ENST00000363652 99 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms