Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNY1P8-201ENST00000383970 114 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR491-201ENST00000384877 84 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR449B-201ENST00000384995 97 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 MRPS21P3-201ENST00000436696 262 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 SNORD2-201ENST00000459163 69 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 SNORA31.9-201ENST00000516429 84 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC027667.1-201ENST00000545814 304 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 RN7SL600P-201ENST00000581811 299 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 AL138721.1-201ENST00000616756 179 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC244669.1-204ENST00000621564 178 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 DNM1P47-203ENST00000571780 12667 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 AL121839.2-201ENST00000565058 6943 ntBASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-11Q9BYQ6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-1169P-201ENST00000363537 103 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-1279P-201ENST00000383917 103 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU1-13P-201ENST00000384499 162 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR200C-201ENST00000384980 68 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU11-3P-201ENST00000391111 133 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP317-201ENST00000410176 116 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP311-201ENST00000411290 116 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC244090.1-201ENST00000441884 93 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 snoU13.29-201ENST00000459370 104 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC003982.1-202ENST00000469928 248 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP315-201ENST00000516340 116 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-782P-201ENST00000516852 104 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP312-201ENST00000517068 116 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR4660-201ENST00000583549 74 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR4639-201ENST00000584938 69 ntBASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-11Q9BYQ6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 SNORD113.3-201ENST00000364630 78 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-716P-201ENST00000365621 103 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR7-3-201ENST00000384898 110 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU1-119P-201ENST00000391122 165 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC004965.1-201ENST00000413033 213 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC083899.1-201ENST00000454465 3819 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU7-40P-201ENST00000516397 64 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 SNORA70.24-201ENST00000517233 118 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 RN7SL435P-201ENST00000584418 282 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC114781.5-201ENST00000615297 108 ntBASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms