Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SNORA20-201ENST00000384662 132 ntBASIC1.92□□□□□ -2.1
SMOQ99835 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMOQ99835 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
SMOQ99835 MIR891A-201ENST00000401237 79 ntBASIC1.92□□□□□ -2.1
SMOQ99835 MIR513C-201ENST00000401352 84 ntBASIC1.92□□□□□ -2.1
SMOQ99835 RPL30P13-201ENST00000418873 348 ntBASIC1.92□□□□□ -2.1
SMOQ99835 PGBD4P5-201ENST00000445958 426 ntBASIC1.92□□□□□ -2.1
SMOQ99835 MIR4778-201ENST00000577635 80 ntBASIC1.92□□□□□ -2.1
SMOQ99835 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.92□□□□□ -2.1
SMOQ99835 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
SMOQ99835 AL513423.1-201ENST00000621695 132 ntBASIC1.92□□□□□ -2.1
SMOQ99835 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMOQ99835 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMOQ99835 Y_RNA.251-201ENST00000364551 99 ntBASIC1.91□□□□□ -2.1
SMOQ99835 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
SMOQ99835 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.91□□□□□ -2.1
SMOQ99835 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.91□□□□□ -2.1
SMOQ99835 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
SMOQ99835 AC108729.3-201ENST00000513484 108 ntBASIC1.91□□□□□ -2.1
SMOQ99835 RNU6-406P-201ENST00000516470 107 ntBASIC1.91□□□□□ -2.1
SMOQ99835 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
SMOQ99835 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
SMOQ99835 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
SMOQ99835 MIR3129-201ENST00000581095 76 ntBASIC1.91□□□□□ -2.1
SMOQ99835 AL365205.2-201ENST00000594586 68 ntBASIC1.91□□□□□ -2.1
SMOQ99835 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
SMOQ99835 AC095038.3-201ENST00000634439 195 ntBASIC1.91□□□□□ -2.1
SMOQ99835 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
SMOQ99835 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
SMOQ99835 Y_RNA.547-201ENST00000384654 119 ntBASIC1.9□□□□□ -2.11
SMOQ99835 MIR660-201ENST00000385235 97 ntBASIC1.9□□□□□ -2.11
SMOQ99835 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
SMOQ99835 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
SMOQ99835 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
SMOQ99835 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SMOQ99835 MIR424-201ENST00000362227 98 ntBASIC1.89□□□□□ -2.11
SMOQ99835 SNORD77.3-201ENST00000391113 65 ntBASIC1.89□□□□□ -2.11
SMOQ99835 RNU6-460P-201ENST00000391158 108 ntBASIC1.89□□□□□ -2.11
SMOQ99835 AC015922.2-201ENST00000435593 184 ntBASIC1.89□□□□□ -2.11
SMOQ99835 AF228730.3-201ENST00000436691 102 ntBASIC1.89□□□□□ -2.11
SMOQ99835 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
SMOQ99835 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
SMOQ99835 AC015726.2-201ENST00000620112 122 ntBASIC1.89□□□□□ -2.11
SMOQ99835 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.89□□□□□ -2.11
SMOQ99835 SNORD3E-202ENST00000627253 216 ntBASIC1.89□□□□□ -2.11
SMOQ99835 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SMOQ99835 AC010332.2-201ENST00000613083 1904 ntBASIC1.88□□□□□ -2.11
SMOQ99835 Y_RNA.420-201ENST00000384043 110 ntBASIC1.88□□□□□ -2.11
SMOQ99835 Y_RNA.542-201ENST00000384641 111 ntBASIC1.88□□□□□ -2.11
SMOQ99835 MIR194-1-201ENST00000384892 85 ntBASIC1.88□□□□□ -2.11
SMOQ99835 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SMOQ99835 RNU6-257P-201ENST00000410238 98 ntBASIC1.88□□□□□ -2.11
SMOQ99835 RNA5SP127-201ENST00000411051 133 ntBASIC1.88□□□□□ -2.11
SMOQ99835 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.88□□□□□ -2.11
SMOQ99835 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.88□□□□□ -2.11
SMOQ99835 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
SMOQ99835 AC090142.3-201ENST00000519012 385 ntBASIC1.88□□□□□ -2.11
SMOQ99835 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
SMOQ99835 AP001485.1-201ENST00000604799 199 ntBASIC1.88□□□□□ -2.11
SMOQ99835 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
SMOQ99835 MIR376A2-201ENST00000636782 80 ntBASIC1.88□□□□□ -2.11
SMOQ99835 AL157777.2-201ENST00000258070 137 ntBASIC1.87□□□□□ -2.11
SMOQ99835 MIR526A1-201ENST00000384897 85 ntBASIC1.87□□□□□ -2.11
SMOQ99835 MIR516B2-201ENST00000385190 85 ntBASIC1.87□□□□□ -2.11
SMOQ99835 MIR624-201ENST00000385217 97 ntBASIC1.87□□□□□ -2.11
SMOQ99835 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
SMOQ99835 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
SMOQ99835 TMSB4XP3-201ENST00000445144 114 ntBASIC1.87□□□□□ -2.11
SMOQ99835 SNORA18.4-201ENST00000516440 124 ntBASIC1.87□□□□□ -2.11
SMOQ99835 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
SMOQ99835 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
SMOQ99835 SNORD115-28-201ENST00000363931 81 ntBASIC1.86□□□□□ -2.11
SMOQ99835 SNORD38C-201ENST00000384381 69 ntBASIC1.86□□□□□ -2.11
SMOQ99835 Y_RNA.586-201ENST00000391146 98 ntBASIC1.86□□□□□ -2.11
SMOQ99835 AL161935.2-201ENST00000414627 60 ntBASIC1.86□□□□□ -2.11
SMOQ99835 MTND4LP9-201ENST00000427694 174 ntBASIC1.86□□□□□ -2.11
SMOQ99835 RNU4-57P-201ENST00000515980 135 ntBASIC1.86□□□□□ -2.11
SMOQ99835 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
SMOQ99835 RNU6-789P-201ENST00000517105 102 ntBASIC1.86□□□□□ -2.11
SMOQ99835 AC131055.1-201ENST00000584626 316 ntBASIC1.86□□□□□ -2.11
SMOQ99835 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
SMOQ99835 Y_RNA.37-201ENST00000362606 108 ntBASIC1.85□□□□□ -2.11
SMOQ99835 Y_RNA.52-201ENST00000362760 96 ntBASIC1.85□□□□□ -2.11
SMOQ99835 RNU6-457P-201ENST00000363999 107 ntBASIC1.85□□□□□ -2.11
SMOQ99835 RNU6-1292P-201ENST00000383856 107 ntBASIC1.85□□□□□ -2.11
SMOQ99835 Y_RNA.508-201ENST00000384502 114 ntBASIC1.85□□□□□ -2.11
SMOQ99835 Y_RNA.584-201ENST00000391090 114 ntBASIC1.85□□□□□ -2.11
SMOQ99835 RNU6-938P-201ENST00000411285 103 ntBASIC1.85□□□□□ -2.11
SMOQ99835 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
SMOQ99835 RNU2-60P-201ENST00000517290 128 ntBASIC1.85□□□□□ -2.11
SMOQ99835 SUMO2P16-201ENST00000519475 264 ntBASIC1.85□□□□□ -2.11
SMOQ99835 MIR4713-201ENST00000582691 75 ntBASIC1.85□□□□□ -2.11
SMOQ99835 MIR4781-201ENST00000585250 76 ntBASIC1.85□□□□□ -2.11
SMOQ99835 AP000942.3-201ENST00000603702 160 ntBASIC1.85□□□□□ -2.11
SMOQ99835 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.85□□□□□ -2.11
SMOQ99835 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
SMOQ99835 AC091895.1-201ENST00000624494 256 ntBASIC1.85□□□□□ -2.11
SMOQ99835 AC132825.6-201ENST00000638861 357 ntBASIC1.85□□□□□ -2.11
SMOQ99835 RNU6-1123P-201ENST00000362347 106 ntBASIC1.84□□□□□ -2.11
SMOQ99835 U8.1-201ENST00000362843 134 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms