Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 Y_RNA.470-201ENST00000384307 117 ntBASIC3.38□□□□□ -1.87
PHOX2BQ99453 RNU7-34P-201ENST00000459394 64 ntBASIC3.38□□□□□ -1.87
PHOX2BQ99453 AC008885.1-201ENST00000514930 301 ntBASIC3.38□□□□□ -1.87
PHOX2BQ99453 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PHOX2BQ99453 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
PHOX2BQ99453 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PHOX2BQ99453 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHOX2BQ99453 RNU6-1276P-201ENST00000365372 104 ntBASIC3.37□□□□□ -1.87
PHOX2BQ99453 SNORA70B-201ENST00000384210 135 ntBASIC3.37□□□□□ -1.87
PHOX2BQ99453 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PHOX2BQ99453 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.37□□□□□ -1.87
PHOX2BQ99453 AC108729.3-201ENST00000513484 108 ntBASIC3.37□□□□□ -1.87
PHOX2BQ99453 RNA5SP367-201ENST00000516557 118 ntBASIC3.37□□□□□ -1.87
PHOX2BQ99453 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.37□□□□□ -1.87
PHOX2BQ99453 MIR4709-201ENST00000577272 72 ntBASIC3.37□□□□□ -1.87
PHOX2BQ99453 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHOX2BQ99453 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PHOX2BQ99453 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PHOX2BQ99453 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
PHOX2BQ99453 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PHOX2BQ99453 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PHOX2BQ99453 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHOX2BQ99453 SNORD115-35-201ENST00000365122 82 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 RNU1-148P-201ENST00000384472 162 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 MIR660-201ENST00000385235 97 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 RNU2-40P-201ENST00000410833 196 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 snoU13.16-201ENST00000459350 104 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 SNORD123-201ENST00000459473 70 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 AC103810.6-201ENST00000606708 136 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 MIR4791-201ENST00000607666 84 ntBASIC3.36□□□□□ -1.87
PHOX2BQ99453 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PHOX2BQ99453 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PHOX2BQ99453 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PHOX2BQ99453 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PHOX2BQ99453 SNORA48.1-201ENST00000390879 135 ntBASIC3.35□□□□□ -1.87
PHOX2BQ99453 RN7SL863P-201ENST00000462370 296 ntBASIC3.35□□□□□ -1.87
PHOX2BQ99453 SCARNA16.3-201ENST00000516595 184 ntBASIC3.35□□□□□ -1.87
PHOX2BQ99453 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.35□□□□□ -1.87
PHOX2BQ99453 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PHOX2BQ99453 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.35□□□□□ -1.87
PHOX2BQ99453 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PHOX2BQ99453 RNU6-813P-201ENST00000384691 107 ntBASIC3.34□□□□□ -1.87
PHOX2BQ99453 MIR597-201ENST00000384968 97 ntBASIC3.34□□□□□ -1.87
PHOX2BQ99453 BTF3P4-201ENST00000418852 495 ntBASIC3.34□□□□□ -1.87
PHOX2BQ99453 AC022202.1-201ENST00000613515 211 ntBASIC3.34□□□□□ -1.87
PHOX2BQ99453 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PHOX2BQ99453 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PHOX2BQ99453 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PHOX2BQ99453 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHOX2BQ99453 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHOX2BQ99453 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
PHOX2BQ99453 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
PHOX2BQ99453 MIR548AR-201ENST00000582191 57 ntBASIC3.33□□□□□ -1.88
PHOX2BQ99453 MIR548Z-201ENST00000584743 97 ntBASIC3.33□□□□□ -1.88
PHOX2BQ99453 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.33□□□□□ -1.88
PHOX2BQ99453 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
PHOX2BQ99453 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
PHOX2BQ99453 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PHOX2BQ99453 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.33□□□□□ -1.88
PHOX2BQ99453 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHOX2BQ99453 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHOX2BQ99453 AC062016.1-201ENST00000355719 319 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 RNU6-228P-201ENST00000362700 106 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 RNU1-51P-201ENST00000365345 176 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PHOX2BQ99453 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 U1.36-201ENST00000620684 176 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 AP003355.3-201ENST00000623465 114 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 AC091304.10-201ENST00000641554 121 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PHOX2BQ99453 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
PHOX2BQ99453 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PHOX2BQ99453 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PHOX2BQ99453 SNORD38.1-201ENST00000363863 68 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 EEF1A1P41-201ENST00000414667 207 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 RNU7-26P-201ENST00000458980 63 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 snoU13.27-201ENST00000459278 104 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 AC008413.1-201ENST00000511864 177 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 RNU7-2P-201ENST00000516096 62 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 AC021506.2-201ENST00000612354 169 ntBASIC3.31□□□□□ -1.88
PHOX2BQ99453 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PHOX2BQ99453 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PHOX2BQ99453 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PHOX2BQ99453 AP000648.3-201ENST00000623539 4507 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
PHOX2BQ99453 Y_RNA.190-201ENST00000363964 101 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 RNU6-497P-201ENST00000365316 104 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 Y_RNA.426-201ENST00000384068 113 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 SNORA32-201ENST00000384072 121 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 MIR518A2-201ENST00000384966 87 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 MIR1283-2-201ENST00000408621 87 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 RNU6-402P-201ENST00000410678 103 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 HMGN2P3-201ENST00000433603 273 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 HMGN2P5-201ENST00000436882 273 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 AC093850.1-201ENST00000454121 251 ntBASIC3.3□□□□□ -1.88
PHOX2BQ99453 SUB1P4-201ENST00000566062 339 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms