Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 TOMM22P2-201ENST00000430735 237 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 AC018634.1-201ENST00000437554 401 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 AC245102.2-201ENST00000448956 180 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 RNU6-717P-201ENST00000459076 104 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 CKS1BP2-201ENST00000497342 240 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 Y_RNA.666-201ENST00000516187 112 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 RNU6-917P-201ENST00000516294 104 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 RNU6-63P-201ENST00000516690 95 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 RNU6-1183P-201ENST00000517054 60 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 MIR3134-201ENST00000579433 74 ntBASIC2.26□□□□□ -2.05
NAF1Q96HR8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
NAF1Q96HR8 ADAM3A-203ENST00000461344 2157 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNU6-478P-201ENST00000363904 110 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNU1-96P-201ENST00000364163 162 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNU6-1138P-201ENST00000365359 106 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 SNORD61-201ENST00000384252 73 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 U8.17-201ENST00000391292 132 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 MIR1912-201ENST00000410389 80 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNU6-887P-201ENST00000410660 100 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.25□□□□□ -2.05
NAF1Q96HR8 HMGN2P23-201ENST00000456759 269 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RPL36AP21-201ENST00000490372 323 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNU7-149P-201ENST00000516739 59 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 RNA5SP290-201ENST00000517133 127 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 CR383656.8-201ENST00000549046 145 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 AC078899.2-201ENST00000595282 212 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 AC005972.2-201ENST00000604690 348 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 Pinc.1-201ENST00000616452 154 ntBASIC2.25□□□□□ -2.05
NAF1Q96HR8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NAF1Q96HR8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NAF1Q96HR8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NAF1Q96HR8 Y_RNA.95-201ENST00000363079 95 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 SNORD58A-201ENST00000383875 65 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 RNU6-679P-201ENST00000391003 106 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 AC019205.3-201ENST00000424573 156 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 SNRPGP10-201ENST00000432323 225 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 SCARNA18B-201ENST00000458806 135 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 RNU2-35P-201ENST00000516446 142 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 RNU6-1256P-201ENST00000516539 103 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 RNU1-117P-201ENST00000517041 158 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.24□□□□□ -2.05
NAF1Q96HR8 RPL23AP91-201ENST00000569211 455 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 SNORD11B-201ENST00000607707 90 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 U2.21-201ENST00000637295 81 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 AP006437.1-201ENST00000641440 3685 ntBASIC2.24□□□□□ -2.05
NAF1Q96HR8 SNORD114-7-201ENST00000362520 77 ntBASIC2.23□□□□□ -2.05
NAF1Q96HR8 RNA5SP201-201ENST00000410316 124 ntBASIC2.23□□□□□ -2.05
NAF1Q96HR8 SCARNA15.2-201ENST00000516409 127 ntBASIC2.23□□□□□ -2.05
NAF1Q96HR8 RNU7-172P-201ENST00000517125 64 ntBASIC2.23□□□□□ -2.05
NAF1Q96HR8 HSPE1P18-201ENST00000517602 280 ntBASIC2.23□□□□□ -2.05
NAF1Q96HR8 U6.99-201ENST00000637524 83 ntBASIC2.23□□□□□ -2.05
NAF1Q96HR8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NAF1Q96HR8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NAF1Q96HR8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NAF1Q96HR8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NAF1Q96HR8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
NAF1Q96HR8 RNU6-117P-201ENST00000365415 107 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RNU6-438P-201ENST00000365561 103 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 MIR208B-201ENST00000401172 77 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RNA5SP511-201ENST00000410487 115 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RNU2-68P-201ENST00000410878 191 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RNU6-1245P-201ENST00000411130 106 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RPL23AP42-201ENST00000471152 471 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 RNU7-116P-201ENST00000516940 62 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 LINC00933-203ENST00000559812 219 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 AC140658.3-201ENST00000567603 271 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 AC095038.3-201ENST00000634439 195 ntBASIC2.22□□□□□ -2.05
NAF1Q96HR8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
NAF1Q96HR8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
NAF1Q96HR8 AC002543.1-201ENST00000299783 1954 ntBASIC2.21□□□□□ -2.05
NAF1Q96HR8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
NAF1Q96HR8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.21□□□□□ -2.06
NAF1Q96HR8 Y_RNA.57-201ENST00000362806 113 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 RNU6-363P-201ENST00000362895 105 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 RNU6-888P-201ENST00000363010 101 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 RNU6-622P-201ENST00000384272 103 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 MIR873-201ENST00000401120 77 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 AC007919.1-201ENST00000429380 217 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 AL035398.1-201ENST00000430869 322 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 Z98742.2-201ENST00000431564 187 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 RPS26P55-201ENST00000471178 356 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.21□□□□□ -2.06
NAF1Q96HR8 Y_RNA.705-201ENST00000516862 110 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 RNU6-1015P-201ENST00000517121 99 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 RNU6-1270P-201ENST00000517128 108 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 MIR3163-201ENST00000581592 73 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 MIR3199-1-201ENST00000582434 88 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 AC021443.1-201ENST00000604478 211 ntBASIC2.21□□□□□ -2.06
NAF1Q96HR8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 293.3 ms