Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNA5SP127-201ENST00000411051 133 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 AC015922.2-201ENST00000435593 184 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 TMSB4XP3-201ENST00000445144 114 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 RPL23AP6-201ENST00000446637 472 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 MIR4778-201ENST00000577635 80 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 MIR3129-201ENST00000581095 76 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 AC015726.2-201ENST00000620112 122 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 RNU6-414P-201ENST00000363705 104 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 Y_RNA.251-201ENST00000364551 99 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 RNU6-1292P-201ENST00000383856 107 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 Y_RNA.497-201ENST00000384447 98 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 AC093850.1-201ENST00000454121 251 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 AC092991.1-201ENST00000477176 376 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 SNORA18.4-201ENST00000516440 124 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 MIR3910-1-201ENST00000580936 111 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 AP001485.1-201ENST00000604799 199 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 AC134878.1-201ENST00000619901 243 ntBASIC1.8□□□□□ -2.12
ATG4AQ8WYN0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 SNORD115-28-201ENST00000363931 81 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 AL161935.2-201ENST00000414627 60 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 JTBP1-201ENST00000441314 247 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 RNU6-830P-201ENST00000516353 107 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 RNU6-789P-201ENST00000517105 102 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 MIR4524B-201ENST00000581569 115 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 AC131055.1-201ENST00000584626 316 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 ICE2P2-201ENST00000483823 2787 ntBASIC1.79□□□□□ -2.12
ATG4AQ8WYN0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 RNY1P11-201ENST00000363759 113 ntBASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 Y_RNA.584-201ENST00000391090 114 ntBASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 SNORD77.3-201ENST00000391113 65 ntBASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 AC004965.1-201ENST00000413033 213 ntBASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 AF228730.3-201ENST00000436691 102 ntBASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 RNU6-406P-201ENST00000516470 107 ntBASIC1.78□□□□□ -2.12
ATG4AQ8WYN0 AC010332.2-201ENST00000613083 1904 ntBASIC1.78□□□□□ -2.13
ATG4AQ8WYN0 AC092881.1-201ENST00000638218 2733 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 RNA5SP432-201ENST00000362480 116 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 Y_RNA.37-201ENST00000362606 108 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 Y_RNA.410-201ENST00000383992 113 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 Y_RNA.420-201ENST00000384043 110 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 MIR516B2-201ENST00000385190 85 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 RNU6-460P-201ENST00000391158 108 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 RNU4-57P-201ENST00000515980 135 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 RNA5SP272-201ENST00000516095 111 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
ATG4AQ8WYN0 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 MIR136-201ENST00000385207 82 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 SNORA40.18-201ENST00000391200 128 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 MIR1267-201ENST00000408723 78 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 AC087499.4-201ENST00000448505 178 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 MIR5197-201ENST00000583721 112 ntBASIC1.76□□□□□ -2.13
ATG4AQ8WYN0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 Y_RNA.52-201ENST00000362760 96 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 RNU6-457P-201ENST00000363999 107 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 RNU6-1189P-201ENST00000383958 107 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 SNORA20-201ENST00000384662 132 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 RNU6-257P-201ENST00000410238 98 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 RNA5SP233-201ENST00000459153 113 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 AC108210.2-201ENST00000503681 201 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 AL627230.6-201ENST00000611129 280 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 AC084768.2-201ENST00000622736 221 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 AP001340.1-201ENST00000624405 217 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 AC091895.1-201ENST00000624494 256 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 AC132825.6-201ENST00000638861 357 ntBASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ATG4AQ8WYN0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 SNORA40-201ENST00000388090 126 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 RNU6-938P-201ENST00000411285 103 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 AL591806.2-201ENST00000433122 173 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 RPL23AP42-201ENST00000471152 471 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 SUMO2P16-201ENST00000519475 264 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 AP003484.1-201ENST00000530974 250 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
ATG4AQ8WYN0 MIR376A2-201ENST00000636782 80 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms