Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MIR3129-201ENST00000581095 76 ntBASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 AC095038.3-201ENST00000634439 195 ntBASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 SNORD115-28-201ENST00000363931 81 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 MIR452-201ENST00000385020 85 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 SNORD77.3-201ENST00000391113 65 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 RNA5SP127-201ENST00000411051 133 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 AF228730.3-201ENST00000436691 102 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 RNU6-426P-201ENST00000516464 97 ntBASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCHCR1Q8TD31 RNU6-414P-201ENST00000363705 104 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 RNU6-439P-201ENST00000384188 106 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 Y_RNA.497-201ENST00000384447 98 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 RNU4-57P-201ENST00000515980 135 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 RNU6-406P-201ENST00000516470 107 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 MIR4778-201ENST00000577635 80 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 MIR3910-1-201ENST00000580936 111 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 AC134878.1-201ENST00000619901 243 ntBASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CCHCR1Q8TD31 Y_RNA.410-201ENST00000383992 113 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 MIR526A1-201ENST00000384897 85 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 CYCSP49-201ENST00000420810 319 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 UBL5P3-201ENST00000475112 231 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 SNORA25.12-201ENST00000516202 82 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 SNORA18.4-201ENST00000516440 124 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 AC131055.1-201ENST00000584626 316 ntBASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCHCR1Q8TD31 Y_RNA.37-201ENST00000362606 108 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 MIR1261-201ENST00000408659 82 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 TMSB4XP3-201ENST00000445144 114 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 AC087499.4-201ENST00000448505 178 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 RNU6-789P-201ENST00000517105 102 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 MIR3618-201ENST00000580330 88 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 AP001485.1-201ENST00000604799 199 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 AC015726.2-201ENST00000620112 122 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 AP001340.1-201ENST00000624405 217 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 AC010332.2-201ENST00000613083 1904 ntBASIC1.91□□□□□ -2.1
CCHCR1Q8TD31 MIR136-201ENST00000385207 82 ntBASIC1.9□□□□□ -2.11
CCHCR1Q8TD31 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCHCR1Q8TD31 RNU6-938P-201ENST00000411285 103 ntBASIC1.9□□□□□ -2.11
CCHCR1Q8TD31 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
CCHCR1Q8TD31 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCHCR1Q8TD31 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 Y_RNA.420-201ENST00000384043 110 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 Y_RNA.584-201ENST00000391090 114 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 RNU6-257P-201ENST00000410238 98 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 RNA5SP272-201ENST00000516095 111 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 MIR5197-201ENST00000583721 112 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 MIR376A2-201ENST00000636782 80 ntBASIC1.89□□□□□ -2.11
CCHCR1Q8TD31 Y_RNA.52-201ENST00000362760 96 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 RNU6-81P-201ENST00000365608 104 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 Y_RNA.586-201ENST00000391146 98 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 RNU6-460P-201ENST00000391158 108 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 SCARNA15-202ENST00000516881 127 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
CCHCR1Q8TD31 Y_RNA.120-201ENST00000363304 110 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 SNORA2.2-201ENST00000365473 135 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 RNU6-1189P-201ENST00000383958 107 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 MTND4LP9-201ENST00000427694 174 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 SNORD36C-201ENST00000516733 66 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 RNU2-60P-201ENST00000517290 128 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 DEFB122-202ENST00000569013 197 ntBASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.87□□□□□ -2.11
CCHCR1Q8TD31 SNORA20-201ENST00000384662 132 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 MIR513A1-201ENST00000385138 129 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 SNORA40-201ENST00000388090 126 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 U8.17-201ENST00000391292 132 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 RNU6-917P-201ENST00000516294 104 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 AP003484.1-201ENST00000530974 250 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 AC132825.6-201ENST00000638861 357 ntBASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCHCR1Q8TD31 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 U8.1-201ENST00000362843 134 ntBASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 SNORD113-1-201ENST00000365321 69 ntBASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 SNORA40.5-201ENST00000391061 128 ntBASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 RNA5SP236-201ENST00000516169 116 ntBASIC1.85□□□□□ -2.11
CCHCR1Q8TD31 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms