Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC116Q8IYX3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC116Q8IYX3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC116Q8IYX3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 SNORD38.1-201ENST00000363863 68 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 Y_RNA.316-201ENST00000365118 111 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 MIR136-201ENST00000385207 82 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 AL445685.2-201ENST00000422551 342 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 RNU7-73P-201ENST00000458743 63 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 AC026271.5-201ENST00000577873 130 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 SEPT14P17-201ENST00000617978 177 ntBASIC3.09□□□□□ -1.91
CCDC116Q8IYX3 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 MIR206-201ENST00000384872 86 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 AC139453.2-201ENST00000487255 133 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 MIR5094-201ENST00000578766 85 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 AC243994.1-201ENST00000618627 109 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 SNORD3E-202ENST00000627253 216 ntBASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CCDC116Q8IYX3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 RNU1-58P-201ENST00000362413 163 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 RNU1-33P-201ENST00000364249 162 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 RNU6-950P-201ENST00000384651 107 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 SNORD28B-201ENST00000390993 75 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 RNU6-1307P-201ENST00000391012 103 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 MIR4513-201ENST00000581077 86 ntBASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC116Q8IYX3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 RNU1-109P-201ENST00000383960 147 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 RNA5SP293-201ENST00000410527 113 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 RPS29P28-201ENST00000446439 141 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 AC093850.1-201ENST00000454121 251 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 AC104027.1-201ENST00000521887 300 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 MIR548AR-201ENST00000582191 57 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 MIR5195-201ENST00000583555 115 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC116Q8IYX3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 Y_RNA.94-201ENST00000363068 106 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 RNU6-342P-201ENST00000384521 104 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 MIR34C-201ENST00000384831 77 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 MIR183-201ENST00000384958 110 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 RNU6-826P-201ENST00000516827 104 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 U6.105-201ENST00000637379 88 ntBASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC116Q8IYX3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 RNU6-1244P-201ENST00000363614 108 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 RNU6-1031P-201ENST00000384773 107 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 MIR29C-201ENST00000385231 88 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 MIR889-201ENST00000401280 79 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 HMGN1P33-201ENST00000432945 451 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 AC245047.7-201ENST00000440265 293 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 MIR3124-201ENST00000582636 67 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
CCDC116Q8IYX3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 BX510359.4-201ENST00000423750 193 ntBASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 SNORD123-201ENST00000459473 70 ntBASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 AC022202.1-201ENST00000613515 211 ntBASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 MIR7975-201ENST00000619350 68 ntBASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC116Q8IYX3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 AC005336.3-201ENST00000623833 2679 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 SNORD56.3-201ENST00000363507 71 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 SNORD115-27-201ENST00000364430 82 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 Y_RNA.567-201ENST00000384736 106 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms