Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 AC023790.1-201ENST00000482174 347 ntBASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 AC090897.1-201ENST00000580909 226 ntBASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 SNORD14A-201ENST00000606526 91 ntBASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 AC019176.2-201ENST00000611579 315 ntBASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 Z97988.1-201ENST00000637697 135 ntBASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LAPTM4BQ86VI4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 RNU6-811P-201ENST00000384069 107 ntBASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 RNA5SP292-201ENST00000390974 118 ntBASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 RNU6-587P-201ENST00000391282 106 ntBASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 SNORA70.14-201ENST00000516205 110 ntBASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 CYP3A52P-201ENST00000563326 91 ntBASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LAPTM4BQ86VI4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 SNORA63.1-201ENST00000362493 131 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 RNU6-1031P-201ENST00000384773 107 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 MIR490-201ENST00000384865 128 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 MIR183-201ENST00000384958 110 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 CYCSP4-201ENST00000429682 331 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 AC005786.1-201ENST00000588553 154 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 AC012314.7-201ENST00000619693 93 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 MIR1297-201ENST00000637311 77 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LAPTM4BQ86VI4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 SNORA70.4-201ENST00000365509 134 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 RNU6-540P-201ENST00000384622 101 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 SNORD77.2-201ENST00000391045 68 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 snoU13.22-201ENST00000459428 104 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 Y_RNA.648-201ENST00000459455 110 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 U6.111-201ENST00000636093 83 ntBASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
LAPTM4BQ86VI4 RNU5F-1-201ENST00000362507 117 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 RNA5SP237-201ENST00000410414 113 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 Y_RNA.596-201ENST00000410462 109 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 AC025518.1-201ENST00000479856 347 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 RPS27P21-201ENST00000486977 252 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 SNORA18.5-201ENST00000516616 101 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 MIR4500-201ENST00000579472 76 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 MIR4536-1-201ENST00000583537 88 ntBASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.35□□□□□ -1.87
LAPTM4BQ86VI4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 RNU1-109P-201ENST00000383960 147 ntBASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 RNU6-296P-201ENST00000384608 107 ntBASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 AL159169.1-201ENST00000421119 127 ntBASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 PRSS3P4-201ENST00000453323 162 ntBASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 MIR3944-201ENST00000581277 108 ntBASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
LAPTM4BQ86VI4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LAPTM4BQ86VI4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LAPTM4BQ86VI4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 SNORD46.1-201ENST00000364139 104 ntBASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 SNORA72.6-201ENST00000384520 129 ntBASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-850P-201ENST00000516934 103 ntBASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 MIR7975-201ENST00000619350 68 ntBASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LAPTM4BQ86VI4 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
LAPTM4BQ86VI4 AC141846.1-201ENST00000568348 142 ntBASIC3.32□□□□□ -1.88
LAPTM4BQ86VI4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LAPTM4BQ86VI4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
LAPTM4BQ86VI4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-208P-201ENST00000362431 107 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 SNORA38-201ENST00000363946 132 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 RNY1P2-201ENST00000364820 117 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 MIR154-201ENST00000385243 84 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 SNRPGP12-201ENST00000449481 213 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 HSPE1P24-201ENST00000450782 238 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms