Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 SNORA5B-201ENST00000363786 132 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 SNORA80A-201ENST00000363922 136 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 RNU6-457P-201ENST00000363999 107 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 MIR519C-201ENST00000385053 87 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 RNU6-913P-201ENST00000390913 95 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 RNU6-1307P-201ENST00000391012 103 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 RNU6-613P-201ENST00000410412 108 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 RNU7-35P-201ENST00000517174 62 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 IGKV2-26-201ENST00000518305 343 ntBASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHISA2Q6UWI4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 RNU6-23P-201ENST00000363283 107 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 Y_RNA.565-201ENST00000384719 101 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 Y_RNA.567-201ENST00000384736 106 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 MIR34C-201ENST00000384831 77 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 MIR452-201ENST00000385020 85 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 AL034345.1-201ENST00000407768 123 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 RPS29P28-201ENST00000446439 141 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 SNORA70.19-201ENST00000516717 90 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 AC140658.3-201ENST00000567603 271 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 AC005786.1-201ENST00000588553 154 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA2Q6UWI4 AL356274.2-201ENST00000624379 3752 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 RNU6-315P-201ENST00000362666 107 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 MIR548G-201ENST00000408442 89 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 RNA5SP168-201ENST00000516642 112 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 RNU6-579P-201ENST00000516879 102 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 AC104984.5-201ENST00000586878 94 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 AC006023.1-201ENST00000603944 259 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 U4atac.1-201ENST00000618345 95 ntBASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SHISA2Q6UWI4 MIR136-201ENST00000385207 82 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 RPL31P63-201ENST00000422565 375 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 MIR4425-201ENST00000580572 84 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 RPL12P50-201ENST00000603116 116 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 AC069114.2-201ENST00000604699 304 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 RNU6-90P-201ENST00000606352 106 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 AC243994.1-201ENST00000618627 109 ntBASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA2Q6UWI4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 Y_RNA.173-201ENST00000363776 113 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 RNU6-950P-201ENST00000384651 107 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 MIR516B2-201ENST00000385190 85 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 RNA5SP293-201ENST00000410527 113 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 HSPE1P9-201ENST00000440046 311 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 RPS29P31-201ENST00000446147 164 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 TRBV12-2-201ENST00000489763 344 ntBASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SHISA2Q6UWI4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SHISA2Q6UWI4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 SNORD21-201ENST00000383953 95 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 RNU6-342P-201ENST00000384521 104 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 RNU7-12P-201ENST00000516030 62 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 NDUFB9P3-201ENST00000521269 501 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 MIR548AR-201ENST00000582191 57 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 MIR8055-201ENST00000610739 97 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 U7.4-201ENST00000614961 63 ntBASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.99
SHISA2Q6UWI4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 Y_RNA.545-201ENST00000384652 105 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 MIR887-201ENST00000401258 79 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 RNU1-98P-201ENST00000458992 160 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 RN7SL594P-201ENST00000470590 287 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 AL513043.2-201ENST00000573941 143 ntBASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHISA2Q6UWI4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms