Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 RNA5SP133-201ENST00000363368 119 ntBASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 MTND4LP19-201ENST00000403051 166 ntBASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 STAG3L5P-204ENST00000443759 179 ntBASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-448P-201ENST00000517052 107 ntBASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.01□□□□□ -1.93
RNFT1Q5M7Z0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 Y_RNA.99-201ENST00000363138 105 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 SNORA2B-201ENST00000384583 137 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 MIR184-201ENST00000384962 84 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 AL606517.2-201ENST00000442855 241 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 SNORD4B-201ENST00000459083 72 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 CKS1BP2-201ENST00000497342 240 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 SNORA70.19-201ENST00000516717 90 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 AC007336.1-201ENST00000576365 3828 ntBASIC3□□□□□ -1.93
RNFT1Q5M7Z0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RNFT1Q5M7Z0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 RNU1-70P-201ENST00000362618 164 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-833P-201ENST00000363486 107 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 SNORD114-6-201ENST00000364393 72 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 RNA5SP138-201ENST00000365098 114 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-649P-201ENST00000384463 107 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-342P-201ENST00000384521 104 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-687P-201ENST00000516443 89 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 SCARNA13-201ENST00000516672 275 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 MTND5P40-201ENST00000559945 246 ntBASIC2.99□□□□□ -1.93
RNFT1Q5M7Z0 Y_RNA.98-201ENST00000363109 102 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 SNORD114-10-201ENST00000363409 72 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 MIR218-1-201ENST00000384999 110 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1321P-201ENST00000390905 107 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-913P-201ENST00000390913 95 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 FGF7P7-201ENST00000514120 227 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 MIR4738-201ENST00000579134 87 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 MIR4325-201ENST00000583049 90 ntBASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNFT1Q5M7Z0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-862P-201ENST00000362804 105 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 RNU4-47P-201ENST00000410876 114 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-602P-201ENST00000411155 105 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 Y_RNA.681-201ENST00000516445 113 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 SNORD67.1-201ENST00000516618 108 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 MIR4425-201ENST00000580572 84 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 MIR8054-201ENST00000620877 86 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 UCA1.1-201ENST00000620952 75 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 MIR1297-201ENST00000637311 77 ntBASIC2.97□□□□□ -1.93
RNFT1Q5M7Z0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 SNORA25.9-201ENST00000365087 128 ntBASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 AC245047.7-201ENST00000440265 293 ntBASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 RNU7-48P-201ENST00000458875 63 ntBASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 S100A11P2-201ENST00000467589 312 ntBASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-807P-201ENST00000516805 107 ntBASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 MIR3199-1-201ENST00000582434 88 ntBASIC2.96□□□□□ -1.94
RNFT1Q5M7Z0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-800P-201ENST00000384473 103 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-160P-201ENST00000384591 107 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 MIR561-201ENST00000385216 97 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNA5SP109-201ENST00000391010 116 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 AC006539.3-201ENST00000454258 129 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RN7SL863P-201ENST00000462370 296 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNA5SP341-201ENST00000516261 117 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-70P-201ENST00000516438 60 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNU7-137P-201ENST00000516788 62 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-667P-201ENST00000517186 102 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 AL512598.1-201ENST00000610158 273 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 AC243994.1-201ENST00000618627 109 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 AP001362.1-201ENST00000625165 124 ntBASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNFT1Q5M7Z0 AC008163.1-202ENST00000636004 2889 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 AL355596.1-201ENST00000565399 3996 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 HSBP1P2-201ENST00000299671 229 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-471P-201ENST00000383944 106 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 Y_RNA.508-201ENST00000384502 114 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 RNU7-79P-201ENST00000516082 62 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms