Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 AC113410.1-201ENST00000505029 247 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 RNU7-53P-201ENST00000516705 60 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 FAM71BP1-201ENST00000604431 523 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NR1H3Q13133 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NR1H3Q13133 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
NR1H3Q13133 SNORA48.1-201ENST00000390879 135 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 SNORA26.2-201ENST00000390922 122 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 RN7SKP192-201ENST00000411291 327 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 RPL23AP63-201ENST00000498752 471 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 RPL23AP94-201ENST00000512518 302 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 MIR4709-201ENST00000577272 72 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 MIR3618-201ENST00000580330 88 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 MIR203B-201ENST00000636080 86 ntBASIC3.09□□□□□ -1.91
NR1H3Q13133 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NR1H3Q13133 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NR1H3Q13133 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
NR1H3Q13133 RNY3P2-201ENST00000362918 102 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 Y_RNA.155-201ENST00000363632 101 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NR1H3Q13133 RNU6-1319P-201ENST00000390855 104 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 RNU6-747P-201ENST00000390928 104 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 RNU6-241P-201ENST00000391148 104 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 RNU6-177P-201ENST00000411257 104 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 SCARNA16.3-201ENST00000516595 184 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 RNU6-958P-201ENST00000516995 106 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 AC006023.1-201ENST00000603944 259 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 AL033523.1-201ENST00000605153 153 ntBASIC3.08□□□□□ -1.92
NR1H3Q13133 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H3Q13133 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H3Q13133 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H3Q13133 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H3Q13133 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H3Q13133 SNORD115-19-201ENST00000363098 82 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 SNORD115-18-201ENST00000363293 82 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 SNORD115-17-201ENST00000364612 82 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RNA5SP261-201ENST00000410536 106 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RNU4-69P-201ENST00000410677 143 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RPS3AP1-201ENST00000413190 320 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RPS29P29-201ENST00000456396 171 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 SCARNA23-201ENST00000516060 130 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RNA5SP481-201ENST00000516814 122 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RNA5SP437-201ENST00000517249 129 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 GTF3AP2-201ENST00000557014 266 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 SUB1P4-201ENST00000566062 339 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 MIR4658-201ENST00000584344 65 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 RPL12P50-201ENST00000603116 116 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 AC095038.3-201ENST00000634439 195 ntBASIC3.07□□□□□ -1.92
NR1H3Q13133 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H3Q13133 Y_RNA.171-201ENST00000363760 102 ntBASIC3.06□□□□□ -1.92
NR1H3Q13133 HMGN2P39-201ENST00000398005 273 ntBASIC3.06□□□□□ -1.92
NR1H3Q13133 RNY4P29-201ENST00000410801 97 ntBASIC3.06□□□□□ -1.92
NR1H3Q13133 AC021506.2-201ENST00000612354 169 ntBASIC3.06□□□□□ -1.92
NR1H3Q13133 AL442128.1-201ENST00000615151 90 ntBASIC3.06□□□□□ -1.92
NR1H3Q13133 AL513423.1-201ENST00000621695 132 ntBASIC3.06□□□□□ -1.92
NR1H3Q13133 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NR1H3Q13133 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
NR1H3Q13133 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
NR1H3Q13133 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NR1H3Q13133 Y_RNA.10-201ENST00000362371 110 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 RNY1P7-201ENST00000384743 110 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 RNU6-733P-201ENST00000410759 104 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 snoU13.27-201ENST00000459278 104 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 RNA5SP356-201ENST00000515972 94 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 RNU6-762P-201ENST00000517107 102 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 MALAT1.1-201ENST00000618249 95 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.05□□□□□ -1.92
NR1H3Q13133 MIR1255B1-201ENST00000636325 63 ntBASIC3.05□□□□□ -1.92
NR1H3Q13133 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NR1H3Q13133 SNORA22.1-201ENST00000362701 134 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 RNU6-363P-201ENST00000362895 105 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 RNU6-112P-201ENST00000363599 104 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 RNU4-67P-201ENST00000364569 141 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 RNU6-409P-201ENST00000384114 104 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 SNORD77B-201ENST00000391112 67 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 Y_RNA.601-201ENST00000410500 113 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 RNA5SP501-201ENST00000410990 112 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 RNU6-844P-201ENST00000517175 102 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 DNAJC19P9-201ENST00000555084 351 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 AC103810.6-201ENST00000606708 136 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 Y_RNA.773-201ENST00000607168 90 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 AC064859.1-201ENST00000624741 174 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 SNORD3E-202ENST00000627253 216 ntBASIC3.04□□□□□ -1.92
NR1H3Q13133 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR1H3Q13133 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NR1H3Q13133 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NR1H3Q13133 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NR1H3Q13133 RNU6-1099P-201ENST00000363533 107 ntBASIC3.03□□□□□ -1.92
NR1H3Q13133 MIR660-201ENST00000385235 97 ntBASIC3.03□□□□□ -1.92
NR1H3Q13133 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.03□□□□□ -1.92
NR1H3Q13133 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
NR1H3Q13133 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
NR1H3Q13133 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.03□□□□□ -1.92
NR1H3Q13133 SNORD123-201ENST00000459473 70 ntBASIC3.03□□□□□ -1.92
NR1H3Q13133 MIR4298-201ENST00000584380 73 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms