Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NUBP1P53384 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.85□□□□□ -1.79
NUBP1P53384 MIR635-201ENST00000384830 98 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 MIR548U-201ENST00000390728 81 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 RNA5SP465-201ENST00000391195 109 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 RN7SL330P-201ENST00000469709 307 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 RNA5SP437-201ENST00000517249 129 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 AC022695.1-201ENST00000522089 237 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUBP1P53384 MAPK10-253ENST00000641010 4072 ntBASIC3.85□□□□□ -1.79
NUBP1P53384 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NUBP1P53384 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUBP1P53384 RNU6-301P-201ENST00000384277 107 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 MIR490-201ENST00000384865 128 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 RNU6-587P-201ENST00000391282 106 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 SNORD30.1-201ENST00000391309 70 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 AC011753.1-201ENST00000451001 220 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 AC099513.1-201ENST00000490423 301 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 RNU2-27P-201ENST00000516185 142 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 LINC02471-203ENST00000641941 4752 ntBASIC3.84□□□□□ -1.79
NUBP1P53384 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
NUBP1P53384 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUBP1P53384 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUBP1P53384 Y_RNA.205-201ENST00000364128 113 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 SNORD74.4-201ENST00000364129 80 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 AC015818.7-201ENST00000428754 109 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 AC083863.1-201ENST00000438811 231 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 HSPE1P24-201ENST00000450782 238 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 RNVU1-2-201ENST00000516326 135 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 RNU6-303P-201ENST00000517091 106 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 EIF4BP1-201ENST00000554881 351 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 MIR4276-201ENST00000584832 70 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 AC020914.4-201ENST00000597690 277 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 WWP1P1-201ENST00000466609 2769 ntBASIC3.83□□□□□ -1.8
NUBP1P53384 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.83□□□□□ -1.8
NUBP1P53384 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.83□□□□□ -1.8
NUBP1P53384 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUBP1P53384 RNA5SP292-201ENST00000390974 118 ntBASIC3.82□□□□□ -1.8
NUBP1P53384 HMGN2P39-201ENST00000398005 273 ntBASIC3.82□□□□□ -1.8
NUBP1P53384 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
NUBP1P53384 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.82□□□□□ -1.8
NUBP1P53384 RNA5SP137-201ENST00000516833 135 ntBASIC3.82□□□□□ -1.8
NUBP1P53384 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.82□□□□□ -1.8
NUBP1P53384 AC138749.4-201ENST00000563970 127 ntBASIC3.82□□□□□ -1.8
NUBP1P53384 MIR7154-201ENST00000620673 73 ntBASIC3.82□□□□□ -1.8
NUBP1P53384 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
NUBP1P53384 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NUBP1P53384 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
NUBP1P53384 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUBP1P53384 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUBP1P53384 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUBP1P53384 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUBP1P53384 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUBP1P53384 RNU6-208P-201ENST00000362431 107 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 SNORA48.1-201ENST00000390879 135 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 RNU6-243P-201ENST00000391140 107 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 AC019129.1-201ENST00000403786 261 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 S100A11P2-201ENST00000467589 312 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.81□□□□□ -1.8
NUBP1P53384 SUB1P4-201ENST00000566062 339 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.81□□□□□ -1.8
NUBP1P53384 AC104996.3-201ENST00000590718 94 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 AL096861.1-201ENST00000610899 123 ntBASIC3.81□□□□□ -1.8
NUBP1P53384 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
NUBP1P53384 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NUBP1P53384 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUBP1P53384 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUBP1P53384 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.8□□□□□ -1.8
NUBP1P53384 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NUBP1P53384 RNU6-1254P-201ENST00000391266 104 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 HMGN2P3-201ENST00000433603 273 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 HMGN2P5-201ENST00000436882 273 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 AC104389.3-201ENST00000445629 235 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 MIR5047-201ENST00000579212 100 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 U6.109-201ENST00000636749 87 ntBASIC3.8□□□□□ -1.8
NUBP1P53384 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NUBP1P53384 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUBP1P53384 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUBP1P53384 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUBP1P53384 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
NUBP1P53384 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NUBP1P53384 RNU6-112P-201ENST00000363599 104 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 Y_RNA.532-201ENST00000384590 113 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 MIR627-201ENST00000384979 97 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 COTL1P1-201ENST00000422309 375 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 BX276092.1-201ENST00000427368 251 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 ARF4P2-201ENST00000430209 526 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 SNORD92-201ENST00000585078 85 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NUBP1P53384 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUBP1P53384 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUBP1P53384 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUBP1P53384 AC092435.3-201ENST00000565538 3654 ntBASIC3.79□□□□□ -1.8
NUBP1P53384 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.78□□□□□ -1.8
NUBP1P53384 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.78□□□□□ -1.8
NUBP1P53384 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
NUBP1P53384 Y_RNA.119-201ENST00000363301 96 ntBASIC3.78□□□□□ -1.8
NUBP1P53384 Y_RNA.386-201ENST00000383913 105 ntBASIC3.78□□□□□ -1.8
NUBP1P53384 Y_RNA.491-201ENST00000384417 107 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms