Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNA5SP482-201ENST00000391269 118 ntBASIC2.83□□□□□ -1.96
NEFMP07197 AC099677.2-201ENST00000436385 175 ntBASIC2.83□□□□□ -1.96
NEFMP07197 AC090255.1-201ENST00000495779 349 ntBASIC2.83□□□□□ -1.96
NEFMP07197 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.83□□□□□ -1.96
NEFMP07197 RNU7-28P-201ENST00000516759 62 ntBASIC2.83□□□□□ -1.96
NEFMP07197 RNU6-537P-201ENST00000517277 103 ntBASIC2.83□□□□□ -1.96
NEFMP07197 AC106754.2-201ENST00000623006 233 ntBASIC2.83□□□□□ -1.96
NEFMP07197 MIR376A2-201ENST00000636782 80 ntBASIC2.83□□□□□ -1.96
NEFMP07197 SNORD115-28-201ENST00000363931 81 ntBASIC2.82□□□□□ -1.96
NEFMP07197 Y_RNA.336-201ENST00000365307 109 ntBASIC2.82□□□□□ -1.96
NEFMP07197 MIR1262-201ENST00000408276 93 ntBASIC2.82□□□□□ -1.96
NEFMP07197 RNU6-554P-201ENST00000410466 106 ntBASIC2.82□□□□□ -1.96
NEFMP07197 RNA5SP270-201ENST00000411361 118 ntBASIC2.82□□□□□ -1.96
NEFMP07197 AL356379.1-201ENST00000414105 126 ntBASIC2.82□□□□□ -1.96
NEFMP07197 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.82□□□□□ -1.96
NEFMP07197 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.82□□□□□ -1.96
NEFMP07197 RNU6-240P-201ENST00000516098 97 ntBASIC2.82□□□□□ -1.96
NEFMP07197 RNU7-70P-201ENST00000516941 66 ntBASIC2.82□□□□□ -1.96
NEFMP07197 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NEFMP07197 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
NEFMP07197 Y_RNA.49-201ENST00000362714 112 ntBASIC2.81□□□□□ -1.96
NEFMP07197 RNU6-862P-201ENST00000362804 105 ntBASIC2.81□□□□□ -1.96
NEFMP07197 Y_RNA.198-201ENST00000364013 98 ntBASIC2.81□□□□□ -1.96
NEFMP07197 RNU6-268P-201ENST00000364174 107 ntBASIC2.81□□□□□ -1.96
NEFMP07197 Y_RNA.213-201ENST00000364178 111 ntBASIC2.81□□□□□ -1.96
NEFMP07197 RNA5SP338-201ENST00000410495 85 ntBASIC2.81□□□□□ -1.96
NEFMP07197 HMGN2P38-201ENST00000423806 265 ntBASIC2.81□□□□□ -1.96
NEFMP07197 HMGN2P32-201ENST00000444648 269 ntBASIC2.81□□□□□ -1.96
NEFMP07197 RNU7-25P-201ENST00000516544 62 ntBASIC2.81□□□□□ -1.96
NEFMP07197 RNU6-766P-201ENST00000362478 107 ntBASIC2.8□□□□□ -1.96
NEFMP07197 Y_RNA.37-201ENST00000362606 108 ntBASIC2.8□□□□□ -1.96
NEFMP07197 RNA5SP493-201ENST00000364115 91 ntBASIC2.8□□□□□ -1.96
NEFMP07197 RNU6-690P-201ENST00000365242 106 ntBASIC2.8□□□□□ -1.96
NEFMP07197 RNA5SP37-201ENST00000365420 130 ntBASIC2.8□□□□□ -1.96
NEFMP07197 MIR1302-5-201ENST00000408164 150 ntBASIC2.8□□□□□ -1.96
NEFMP07197 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.8□□□□□ -1.96
NEFMP07197 RNU6-717P-201ENST00000459076 104 ntBASIC2.8□□□□□ -1.96
NEFMP07197 MIR5582-201ENST00000579697 68 ntBASIC2.8□□□□□ -1.96
NEFMP07197 AL589743.1-201ENST00000551932 2712 ntBASIC2.8□□□□□ -1.96
NEFMP07197 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NEFMP07197 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEFMP07197 RNY4P6-201ENST00000363667 96 ntBASIC2.79□□□□□ -1.96
NEFMP07197 Y_RNA.163-201ENST00000363702 113 ntBASIC2.79□□□□□ -1.96
NEFMP07197 Y_RNA.547-201ENST00000384654 119 ntBASIC2.79□□□□□ -1.96
NEFMP07197 SNORA64-201ENST00000384674 134 ntBASIC2.79□□□□□ -1.96
NEFMP07197 MIR759-201ENST00000390224 91 ntBASIC2.79□□□□□ -1.96
NEFMP07197 AC245047.3-201ENST00000429428 127 ntBASIC2.79□□□□□ -1.96
NEFMP07197 AL445646.1-201ENST00000431784 216 ntBASIC2.79□□□□□ -1.96
NEFMP07197 SNRPGP14-201ENST00000435400 219 ntBASIC2.79□□□□□ -1.96
NEFMP07197 SNORD45.4-201ENST00000516629 73 ntBASIC2.79□□□□□ -1.96
NEFMP07197 IGKV3-31-201ENST00000523109 329 ntBASIC2.79□□□□□ -1.96
NEFMP07197 AC026271.5-201ENST00000577873 130 ntBASIC2.79□□□□□ -1.96
NEFMP07197 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEFMP07197 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEFMP07197 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
NEFMP07197 RNU6-23P-201ENST00000363283 107 ntBASIC2.78□□□□□ -1.96
NEFMP07197 Y_RNA.265-201ENST00000364677 108 ntBASIC2.78□□□□□ -1.96
NEFMP07197 RNA5SP138-201ENST00000365098 114 ntBASIC2.78□□□□□ -1.96
NEFMP07197 Y_RNA.369-201ENST00000365568 117 ntBASIC2.78□□□□□ -1.96
NEFMP07197 AC087499.4-201ENST00000448505 178 ntBASIC2.78□□□□□ -1.96
NEFMP07197 RNY4P20-201ENST00000516678 93 ntBASIC2.78□□□□□ -1.96
NEFMP07197 MIR3169-201ENST00000578032 83 ntBASIC2.78□□□□□ -1.96
NEFMP07197 MIR4448-201ENST00000584360 86 ntBASIC2.78□□□□□ -1.96
NEFMP07197 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.78□□□□□ -1.96
NEFMP07197 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.78□□□□□ -1.96
NEFMP07197 AC245060.5-201ENST00000610778 3293 ntBASIC2.78□□□□□ -1.96
NEFMP07197 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NEFMP07197 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NEFMP07197 RNU6-756P-201ENST00000383997 107 ntBASIC2.77□□□□□ -1.97
NEFMP07197 RNY1P6-201ENST00000384193 109 ntBASIC2.77□□□□□ -1.97
NEFMP07197 Y_RNA.549-201ENST00000384657 102 ntBASIC2.77□□□□□ -1.97
NEFMP07197 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.77□□□□□ -1.97
NEFMP07197 RNU6-349P-201ENST00000362402 107 ntBASIC2.76□□□□□ -1.97
NEFMP07197 RNU1-133P-201ENST00000364867 167 ntBASIC2.76□□□□□ -1.97
NEFMP07197 Y_RNA.323-201ENST00000365157 109 ntBASIC2.76□□□□□ -1.97
NEFMP07197 Y_RNA.328-201ENST00000365208 113 ntBASIC2.76□□□□□ -1.97
NEFMP07197 Y_RNA.440-201ENST00000384120 114 ntBASIC2.76□□□□□ -1.97
NEFMP07197 RNU6-1113P-201ENST00000384348 107 ntBASIC2.76□□□□□ -1.97
NEFMP07197 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.76□□□□□ -1.97
NEFMP07197 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.76□□□□□ -1.97
NEFMP07197 RNA5SP233-201ENST00000459153 113 ntBASIC2.76□□□□□ -1.97
NEFMP07197 snoU13.26-201ENST00000459452 105 ntBASIC2.76□□□□□ -1.97
NEFMP07197 MIR4778-201ENST00000577635 80 ntBASIC2.76□□□□□ -1.97
NEFMP07197 AC078899.2-201ENST00000595282 212 ntBASIC2.76□□□□□ -1.97
NEFMP07197 AC021443.1-201ENST00000604478 211 ntBASIC2.76□□□□□ -1.97
NEFMP07197 RNU6-94P-201ENST00000607728 107 ntBASIC2.76□□□□□ -1.97
NEFMP07197 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NEFMP07197 RNU6-1014P-201ENST00000383940 103 ntBASIC2.75□□□□□ -1.97
NEFMP07197 SNORA51.5-201ENST00000384126 131 ntBASIC2.75□□□□□ -1.97
NEFMP07197 Y_RNA.454-201ENST00000384224 113 ntBASIC2.75□□□□□ -1.97
NEFMP07197 SNORA67.3-201ENST00000384366 140 ntBASIC2.75□□□□□ -1.97
NEFMP07197 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.75□□□□□ -1.97
NEFMP07197 RNU2-40P-201ENST00000410833 196 ntBASIC2.75□□□□□ -1.97
NEFMP07197 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NEFMP07197 RNU7-80P-201ENST00000459562 61 ntBASIC2.75□□□□□ -1.97
NEFMP07197 AC055731.1-201ENST00000474387 401 ntBASIC2.75□□□□□ -1.97
NEFMP07197 SNORD36C-201ENST00000516733 66 ntBASIC2.75□□□□□ -1.97
NEFMP07197 AP003484.1-201ENST00000530974 250 ntBASIC2.75□□□□□ -1.97
NEFMP07197 SNORA28-201ENST00000606769 126 ntBASIC2.75□□□□□ -1.97
NEFMP07197 AL035470.1-201ENST00000622571 220 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms