Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 RNU7-45P-201ENST00000459460 63 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 MIR3152-201ENST00000579801 74 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 MIR4668-201ENST00000582284 70 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 AL137790.1-201ENST00000634283 177 ntBASIC3.4□□□□□ -1.87
SPTLC1O15269 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SPTLC1O15269 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SPTLC1O15269 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTLC1O15269 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTLC1O15269 AP000648.3-201ENST00000623539 4507 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 MIR449A-201ENST00000362113 91 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 Y_RNA.96-201ENST00000363092 109 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 RNU6-616P-201ENST00000384353 107 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 RNU4-69P-201ENST00000410677 143 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 Y_RNA.620-201ENST00000411009 88 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 Z96811.1-201ENST00000445880 108 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 RNA5SP168-201ENST00000516642 112 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
SPTLC1O15269 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.39□□□□□ -1.87
SPTLC1O15269 AC092881.1-201ENST00000638218 2733 ntBASIC3.39□□□□□ -1.87
SPTLC1O15269 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTLC1O15269 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTLC1O15269 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTLC1O15269 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 Y_RNA.426-201ENST00000384068 113 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 SNORA54-201ENST00000384281 123 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 MIR452-201ENST00000385020 85 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 HSPE1P9-201ENST00000440046 311 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 RNU6-1258P-201ENST00000516911 111 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.38□□□□□ -1.87
SPTLC1O15269 MIR3162-201ENST00000581818 82 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 AC009487.2-201ENST00000420969 6821 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
SPTLC1O15269 SNORA38-201ENST00000363946 132 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 RNU6-652P-201ENST00000365488 107 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 RNU6-1201P-201ENST00000384227 107 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 Y_RNA.611-201ENST00000410682 108 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 RNU7-113P-201ENST00000459273 62 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 AC019288.1-201ENST00000557918 224 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 MIR4662A-201ENST00000637499 67 ntBASIC3.37□□□□□ -1.87
SPTLC1O15269 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SPTLC1O15269 Y_RNA.191-201ENST00000363972 113 ntBASIC3.36□□□□□ -1.87
SPTLC1O15269 RNU6-776P-201ENST00000364403 104 ntBASIC3.36□□□□□ -1.87
SPTLC1O15269 RNU6-1022P-201ENST00000365049 104 ntBASIC3.36□□□□□ -1.87
SPTLC1O15269 Y_RNA.370-201ENST00000365589 108 ntBASIC3.36□□□□□ -1.87
SPTLC1O15269 Y_RNA.377-201ENST00000365644 108 ntBASIC3.36□□□□□ -1.87
SPTLC1O15269 AL135938.1-201ENST00000443141 297 ntBASIC3.36□□□□□ -1.87
SPTLC1O15269 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.36□□□□□ -1.87
SPTLC1O15269 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SPTLC1O15269 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SPTLC1O15269 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SPTLC1O15269 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SPTLC1O15269 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SPTLC1O15269 Y_RNA.4-201ENST00000362333 112 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 MIR136-201ENST00000385207 82 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNA5SP261-201ENST00000410536 106 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU2-7P-201ENST00000410794 178 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 AC073261.1-201ENST00000429409 121 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU7-26P-201ENST00000458980 63 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU7-67P-201ENST00000459003 62 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 AC139453.2-201ENST00000487255 133 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RPPH1-2P-201ENST00000516688 293 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU7-53P-201ENST00000516705 60 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.35□□□□□ -1.87
SPTLC1O15269 AC006160.2-201ENST00000637708 154 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 AL512310.12-203ENST00000640543 90 ntBASIC3.35□□□□□ -1.87
SPTLC1O15269 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SPTLC1O15269 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
SPTLC1O15269 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SPTLC1O15269 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SPTLC1O15269 MIR597-201ENST00000384968 97 ntBASIC3.34□□□□□ -1.87
SPTLC1O15269 MIR516B2-201ENST00000385190 85 ntBASIC3.34□□□□□ -1.87
SPTLC1O15269 SNORD67-201ENST00000390833 111 ntBASIC3.34□□□□□ -1.87
SPTLC1O15269 RNU2-40P-201ENST00000410833 196 ntBASIC3.34□□□□□ -1.87
SPTLC1O15269 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
SPTLC1O15269 ELOCP29-201ENST00000588193 334 ntBASIC3.34□□□□□ -1.87
SPTLC1O15269 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTLC1O15269 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SPTLC1O15269 SNORD58A-201ENST00000383875 65 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNU1-109P-201ENST00000383960 147 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 Y_RNA.470-201ENST00000384307 117 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNU6-1031P-201ENST00000384773 107 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNU6-1319P-201ENST00000390855 104 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNU6-747P-201ENST00000390928 104 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 SNORD77B-201ENST00000391112 67 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNU6-241P-201ENST00000391148 104 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNU6-177P-201ENST00000411257 104 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 MIR1270-201ENST00000459320 83 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 RNA5SP137-201ENST00000516833 135 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 MIR548AE2-201ENST00000583456 67 ntBASIC3.33□□□□□ -1.88
SPTLC1O15269 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTLC1O15269 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms