Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNVU1-2-201ENST00000516326 135 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR4709-201ENST00000577272 72 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 AC087741.2-201ENST00000619415 172 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-49P-201ENST00000384256 107 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 POLR2J4-204ENST00000418424 324 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-958P-201ENST00000516995 106 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 UBL5P2-201ENST00000583788 219 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR7112-201ENST00000616126 65 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 AL513423.1-201ENST00000621695 132 ntBASIC2.95□□□□□ -1.94
PCDHGA11Q9Y5H2 AP000648.3-201ENST00000623539 4507 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORA63.1-201ENST00000362493 131 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORD115-19-201ENST00000363098 82 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 Y_RNA.107-201ENST00000363190 121 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORD115-18-201ENST00000363293 82 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 Y_RNA.155-201ENST00000363632 101 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORD115-17-201ENST00000364612 82 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU1-51P-201ENST00000365345 176 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR34B-201ENST00000385076 84 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU4-69P-201ENST00000410677 143 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RN7SKP192-201ENST00000411291 327 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RPS29P29-201ENST00000456396 171 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RN7SL20P-201ENST00000488827 297 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RPL23AP63-201ENST00000498752 471 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 SCARNA23-201ENST00000516060 130 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-56P-201ENST00000516986 93 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 U1.36-201ENST00000620684 176 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR203B-201ENST00000636080 86 ntBASIC2.94□□□□□ -1.94
PCDHGA11Q9Y5H2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-409P-201ENST00000384114 104 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 RNVU1-14-201ENST00000384770 164 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORD67-201ENST00000390833 111 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORA26.2-201ENST00000390922 122 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORD77B-201ENST00000391112 67 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 HMGN2P39-201ENST00000398005 273 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 AC113410.1-201ENST00000505029 247 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 SUB1P4-201ENST00000566062 339 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR5004-201ENST00000579078 107 ntBASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA11Q9Y5H2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-363P-201ENST00000362895 105 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 RNY3P2-201ENST00000362918 102 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 Y_RNA.601-201ENST00000410500 113 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-733P-201ENST00000410759 104 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 snoU13.27-201ENST00000459278 104 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORA31.4-201ENST00000516049 129 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR3618-201ENST00000580330 88 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.92□□□□□ -1.94
PCDHGA11Q9Y5H2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA11Q9Y5H2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR488-201ENST00000365739 83 ntBASIC2.91□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR23B-201ENST00000384832 97 ntBASIC2.91□□□□□ -1.94
PCDHGA11Q9Y5H2 AC093850.1-201ENST00000454121 251 ntBASIC2.91□□□□□ -1.94
PCDHGA11Q9Y5H2 SNORD3E-202ENST00000627253 216 ntBASIC2.91□□□□□ -1.94
PCDHGA11Q9Y5H2 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA22.1-201ENST00000362701 134 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORD115-2-201ENST00000362842 82 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU6-1099P-201ENST00000363533 107 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU6-112P-201ENST00000363599 104 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA38.1-201ENST00000364172 131 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU4-67P-201ENST00000364569 141 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORD115-20-201ENST00000365099 82 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR660-201ENST00000385235 97 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU7-45P-201ENST00000459460 63 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU6-844P-201ENST00000517175 102 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 RNA5SP437-201ENST00000517249 129 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 AL513534.2-201ENST00000603836 250 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 AC021506.2-201ENST00000612354 169 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 AL442128.1-201ENST00000615151 90 ntBASIC2.9□□□□□ -1.95
PCDHGA11Q9Y5H2 Y_RNA.171-201ENST00000363760 102 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 RNA5SP171-201ENST00000391071 115 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA11-201ENST00000408789 128 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 RNA5SP501-201ENST00000410990 112 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 RNA5SP270-201ENST00000411361 118 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 PGBD4P5-201ENST00000445958 426 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU7-73P-201ENST00000458743 63 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORD123-201ENST00000459473 70 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 RNA5SP33-201ENST00000516687 98 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR4694-201ENST00000578534 80 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR4658-201ENST00000584344 65 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR92B-201ENST00000607575 96 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 MALAT1.1-201ENST00000618249 95 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 AC243994.1-201ENST00000618627 109 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 AC095038.3-201ENST00000634439 195 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 AL035425.3-201ENST00000564206 4996 ntBASIC2.89□□□□□ -1.95
PCDHGA11Q9Y5H2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA24-201ENST00000384096 131 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 RNY4P29-201ENST00000410801 97 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 RPS29P6-201ENST00000438196 145 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms