Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SYNPO2Q9UMS6 SNORA1-201ENST00000384107 130 ntBASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 SNORA75.5-201ENST00000391291 81 ntBASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 RNA5SP437-201ENST00000517249 129 ntBASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 SUB1P4-201ENST00000566062 339 ntBASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 MIR6845-201ENST00000613182 61 ntBASIC2.26□□□□□ -2.05
SYNPO2Q9UMS6 RNA5SP432-201ENST00000362480 116 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 SNORA63D-201ENST00000364359 132 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 SNORD113-1-201ENST00000365321 69 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 MIR764-201ENST00000390811 85 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 AL021397.1-201ENST00000451806 248 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-971P-201ENST00000516920 106 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 MIR4762-201ENST00000585261 75 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 AC012493.3-201ENST00000604494 112 ntBASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.25□□□□□ -2.05
SYNPO2Q9UMS6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-112P-201ENST00000363599 104 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 SNORA25.7-201ENST00000364375 127 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-296P-201ENST00000384608 107 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-959P-201ENST00000384671 107 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 SNORA40-201ENST00000388090 126 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 RPL23AP63-201ENST00000498752 471 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 AC108210.2-201ENST00000503681 201 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 SNORD45.4-201ENST00000516629 73 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 RNU7-28P-201ENST00000516759 62 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 Y_RNA.714-201ENST00000517065 90 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 MIR4255-201ENST00000579351 72 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 MIR4662B-201ENST00000579498 81 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 MIR3129-201ENST00000581095 76 ntBASIC2.24□□□□□ -2.05
SYNPO2Q9UMS6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 MIRLET7C-201ENST00000362160 84 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-508P-201ENST00000363231 103 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-950P-201ENST00000384651 107 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 MIR520A-201ENST00000384862 85 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 MIR548A2-201ENST00000384956 97 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-482P-201ENST00000391068 107 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNA5SP482-201ENST00000391269 118 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 CALM2P4-201ENST00000430810 426 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-693P-201ENST00000516134 107 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-504P-201ENST00000516568 104 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU1-40P-201ENST00000516816 164 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 RNU1-97P-201ENST00000516872 164 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.23□□□□□ -2.05
SYNPO2Q9UMS6 U8.5-201ENST00000364528 136 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 Y_RNA.294-201ENST00000364916 102 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 U8.16-201ENST00000391279 133 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 RPL31P63-201ENST00000422565 375 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 HMGN2P23-201ENST00000456759 269 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 RNU6-1211P-201ENST00000459179 105 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 AC114811.1-201ENST00000507207 168 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 AC090142.3-201ENST00000519012 385 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 MIR4769-201ENST00000584126 77 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 AL773524.1-201ENST00000614065 229 ntBASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.22□□□□□ -2.05
SYNPO2Q9UMS6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
SYNPO2Q9UMS6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
SYNPO2Q9UMS6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 U8.1-201ENST00000362843 134 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 RNU6-268P-201ENST00000364174 107 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 SNORA26-201ENST00000391286 122 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 MIR548I2-201ENST00000408348 149 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 SNRPGP14-201ENST00000435400 219 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 SNORA28-201ENST00000606769 126 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.21□□□□□ -2.06
SYNPO2Q9UMS6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 SNORD14E-201ENST00000364009 85 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 MIR518F-201ENST00000384973 87 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 MIR802-201ENST00000390235 94 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 Y_RNA.584-201ENST00000391090 114 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 RN7SKP200-201ENST00000410564 320 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 AC244636.1-201ENST00000421152 228 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 RNU6-126P-201ENST00000516685 103 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 RNU6-1234P-201ENST00000516877 103 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 AL365222.1-201ENST00000614661 98 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
SYNPO2Q9UMS6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms