Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-162P-201ENST00000516228 103 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU6-267P-201ENST00000516714 103 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 AL355596.1-201ENST00000565399 3996 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 RNU6-1099P-201ENST00000363533 107 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 SNORA33-201ENST00000363664 130 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 RNU6-1104P-201ENST00000384723 104 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 MIR548A2-201ENST00000384956 97 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 RNA5SP467-201ENST00000391274 118 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 RPS15AP28-201ENST00000435088 386 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 RPL39P25-201ENST00000449384 154 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 AC093259.1-201ENST00000509755 300 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 SCARNA3-201ENST00000517097 143 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 AC008507.4-201ENST00000585464 127 ntBASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LMCD1Q9NZU5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 AC245060.5-201ENST00000610778 3293 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 MIR340-201ENST00000362125 95 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 MIR126-201ENST00000362291 85 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 RNU6-349P-201ENST00000362402 107 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 RNU1-23P-201ENST00000363361 144 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 RNU1-96P-201ENST00000364163 162 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 SNORD24-201ENST00000383884 75 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.601-201ENST00000410500 113 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 RNU4-53P-201ENST00000410828 140 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 AC004941.2-201ENST00000427009 228 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 RN7SL297P-201ENST00000483161 293 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 RNU6-856P-201ENST00000516959 98 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 AC012531.4-201ENST00000616509 177 ntBASIC2.87□□□□□ -1.95
LMCD1Q9NZU5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 SNORA68.1-201ENST00000364537 132 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.298-201ENST00000364960 107 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 AL603825.1-201ENST00000438481 80 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 SNRPGP13-201ENST00000442212 177 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 RNU6-1041P-201ENST00000516254 102 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 RNU7-99P-201ENST00000516271 62 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 AC022523.2-201ENST00000561045 150 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 MIR5739-201ENST00000619803 80 ntBASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.86□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 RNU6-816P-201ENST00000390914 107 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 RNU6-1268P-201ENST00000391214 107 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 RNU6-1239P-201ENST00000391310 107 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 BTF3P4-201ENST00000418852 495 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 AL356320.1-201ENST00000429616 163 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 AC108210.2-201ENST00000503681 201 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 RNU6-795P-201ENST00000516323 103 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 SUMO2P16-201ENST00000519475 264 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 MIR5197-201ENST00000583721 112 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 MIR548Z-201ENST00000584743 97 ntBASIC2.85□□□□□ -1.95
LMCD1Q9NZU5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 RNU6-170P-201ENST00000362832 104 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 SNORD115-35-201ENST00000365122 82 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 MIR518F-201ENST00000384973 87 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 MIR759-201ENST00000390224 91 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 MIR1912-201ENST00000410389 80 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 RNU7-123P-201ENST00000515911 60 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.676-201ENST00000516393 96 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 RNU7-128P-201ENST00000517247 62 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 U4.3-201ENST00000621047 82 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 MIR6079-201ENST00000635807 62 ntBASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMCD1Q9NZU5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
LMCD1Q9NZU5 snoU2-30.2-201ENST00000362805 70 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 RNU6-690P-201ENST00000365242 106 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 MIR802-201ENST00000390235 94 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 RNU6-938P-201ENST00000411285 103 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 AL591806.2-201ENST00000433122 173 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 MIR3163-201ENST00000581592 73 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 ZNF861P-201ENST00000588126 639 ntBASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LMCD1Q9NZU5 ZNF271P-202ENST00000465539 1970 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 RNA5SP393-201ENST00000363423 117 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 Y_RNA.190-201ENST00000363964 101 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 SNORA2.2-201ENST00000365473 135 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 SNORD21-201ENST00000383953 95 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 SNORD116-22-201ENST00000384430 92 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 MIR889-201ENST00000401280 79 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 RN7SKP223-201ENST00000410582 62 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 AC021443.1-201ENST00000604478 211 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 AL359075.3-201ENST00000613288 217 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms