Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 RNU6-811P-201ENST00000384069 107 ntBASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 RN7SKP220-201ENST00000410611 288 ntBASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXD4L1Q9NU39 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 RNA5SP124-201ENST00000362739 110 ntBASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 RNU6-571P-201ENST00000384128 107 ntBASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 AC083863.1-201ENST00000438811 231 ntBASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 RNU6-1108P-201ENST00000516308 104 ntBASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 RNU6-807P-201ENST00000516805 107 ntBASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 AC092435.3-201ENST00000565538 3654 ntBASIC4.59□□□□□ -1.67
FOXD4L1Q9NU39 MIR518A2-201ENST00000384966 87 ntBASIC4.58□□□□□ -1.68
FOXD4L1Q9NU39 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXD4L1Q9NU39 RNU7-26P-201ENST00000458980 63 ntBASIC4.58□□□□□ -1.68
FOXD4L1Q9NU39 PARP1P2-201ENST00000556806 195 ntBASIC4.58□□□□□ -1.68
FOXD4L1Q9NU39 MIR3653-201ENST00000625572 110 ntBASIC4.58□□□□□ -1.68
FOXD4L1Q9NU39 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FOXD4L1Q9NU39 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXD4L1Q9NU39 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXD4L1Q9NU39 Y_RNA.340-201ENST00000365330 92 ntBASIC4.57□□□□□ -1.68
FOXD4L1Q9NU39 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
FOXD4L1Q9NU39 CYCSP29-201ENST00000533731 318 ntBASIC4.57□□□□□ -1.68
FOXD4L1Q9NU39 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 RNA5SP130-201ENST00000364431 114 ntBASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 AC091167.1-201ENST00000492017 396 ntBASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 RN7SKP83-201ENST00000516512 178 ntBASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 MIR3138-201ENST00000585238 82 ntBASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 MIR6830-201ENST00000636015 70 ntBASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD4L1Q9NU39 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 MIR4536-1-201ENST00000583537 88 ntBASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 AC006023.1-201ENST00000603944 259 ntBASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD4L1Q9NU39 RNU1-138P-201ENST00000384093 164 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 RNA5SP501-201ENST00000410990 112 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 AC105272.1-201ENST00000438604 198 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 Y_RNA.681-201ENST00000516445 113 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 RNU6-448P-201ENST00000517052 107 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 RNU6-1015P-201ENST00000517121 99 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 AC138749.4-201ENST00000563970 127 ntBASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD4L1Q9NU39 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 WWP1P1-201ENST00000466609 2769 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 AC023790.1-201ENST00000482174 347 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 RNU6-322P-201ENST00000516010 103 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 MIR5096-201ENST00000583713 70 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 MIR8059-201ENST00000620427 81 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 U6.109-201ENST00000636749 87 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 MIR1297-201ENST00000637311 77 ntBASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD4L1Q9NU39 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
FOXD4L1Q9NU39 AC008163.1-202ENST00000636004 2889 ntBASIC4.52□□□□□ -1.69
FOXD4L1Q9NU39 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 SNORA31.9-201ENST00000516429 84 ntBASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 AL357312.1-201ENST00000603879 298 ntBASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXD4L1Q9NU39 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 MIR423-201ENST00000362201 94 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 RNU6-1123P-201ENST00000362347 106 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 HMGN2P39-201ENST00000398005 273 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 RNA5SP317-201ENST00000410176 116 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 RNA5SP311-201ENST00000411290 116 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 BX276092.1-201ENST00000427368 251 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 RNA5SP315-201ENST00000516340 116 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 RNU6-70P-201ENST00000516438 60 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 RNA5SP312-201ENST00000517068 116 ntBASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
FOXD4L1Q9NU39 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 RNA5SP292-201ENST00000390974 118 ntBASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 SNORD77.2-201ENST00000391045 68 ntBASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 RNU6ATAC42P-201ENST00000408637 95 ntBASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 RNU7-41P-201ENST00000515917 61 ntBASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 MIR3939-201ENST00000582614 106 ntBASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 MIR4484-201ENST00000582855 83 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms