Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RN7SKP111-201ENST00000410349 271 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 RNA5SP144-201ENST00000410846 116 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.7□□□□□ -1.82
RTN4Q9NQC3 Y_RNA.709-201ENST00000516952 92 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 MIR3198-2-201ENST00000577868 80 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 MIR6895-201ENST00000613497 78 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 RNA5SP48-201ENST00000363969 126 ntBASIC3.69□□□□□ -1.82
RTN4Q9NQC3 AL359837.1-201ENST00000381357 287 ntBASIC3.69□□□□□ -1.82
RTN4Q9NQC3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.69□□□□□ -1.82
RTN4Q9NQC3 MIR3163-201ENST00000581592 73 ntBASIC3.69□□□□□ -1.82
RTN4Q9NQC3 MIR6840-201ENST00000611937 71 ntBASIC3.69□□□□□ -1.82
RTN4Q9NQC3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RTN4Q9NQC3 AC092881.1-201ENST00000638218 2733 ntBASIC3.69□□□□□ -1.82
RTN4Q9NQC3 RNU4-16P-201ENST00000364737 141 ntBASIC3.68□□□□□ -1.82
RTN4Q9NQC3 SNORA48.7-201ENST00000391302 135 ntBASIC3.68□□□□□ -1.82
RTN4Q9NQC3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.68□□□□□ -1.82
RTN4Q9NQC3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.68□□□□□ -1.82
RTN4Q9NQC3 RNA5SP119-201ENST00000362715 117 ntBASIC3.67□□□□□ -1.82
RTN4Q9NQC3 AL590004.2-201ENST00000404787 371 ntBASIC3.67□□□□□ -1.82
RTN4Q9NQC3 RNU7-123P-201ENST00000515911 60 ntBASIC3.67□□□□□ -1.82
RTN4Q9NQC3 AL020996.3-201ENST00000606617 222 ntBASIC3.67□□□□□ -1.82
RTN4Q9NQC3 GHRLOS.1-201ENST00000610995 70 ntBASIC3.67□□□□□ -1.82
RTN4Q9NQC3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.67□□□□□ -1.82
RTN4Q9NQC3 MIR23A-201ENST00000385245 73 ntBASIC3.66□□□□□ -1.82
RTN4Q9NQC3 SNORD17-201ENST00000390930 237 ntBASIC3.66□□□□□ -1.82
RTN4Q9NQC3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.66□□□□□ -1.82
RTN4Q9NQC3 RNU6-589P-201ENST00000516485 107 ntBASIC3.66□□□□□ -1.82
RTN4Q9NQC3 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
RTN4Q9NQC3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.66□□□□□ -1.82
RTN4Q9NQC3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.66□□□□□ -1.82
RTN4Q9NQC3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RTN4Q9NQC3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.65□□□□□ -1.82
RTN4Q9NQC3 MIR134-201ENST00000385258 73 ntBASIC3.65□□□□□ -1.83
RTN4Q9NQC3 RPS3AP1-201ENST00000413190 320 ntBASIC3.65□□□□□ -1.83
RTN4Q9NQC3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.65□□□□□ -1.83
RTN4Q9NQC3 SNORD111.1-201ENST00000516421 86 ntBASIC3.65□□□□□ -1.83
RTN4Q9NQC3 IGKV2-26-201ENST00000518305 343 ntBASIC3.65□□□□□ -1.83
RTN4Q9NQC3 MIR4679-2-201ENST00000578358 77 ntBASIC3.65□□□□□ -1.83
RTN4Q9NQC3 AC103810.8-201ENST00000607347 118 ntBASIC3.65□□□□□ -1.83
RTN4Q9NQC3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RTN4Q9NQC3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTN4Q9NQC3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN4Q9NQC3 SNORA1.1-201ENST00000364671 133 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 RNU6-429P-201ENST00000384582 108 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 MIR548A1-201ENST00000385041 97 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.64□□□□□ -1.83
RTN4Q9NQC3 RPL39P39-201ENST00000455840 151 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 MIR92B-201ENST00000607575 96 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 MIR6717-201ENST00000622747 73 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 MIR4251-201ENST00000635819 61 ntBASIC3.64□□□□□ -1.83
RTN4Q9NQC3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4Q9NQC3 RNU6-1065P-201ENST00000384513 106 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 AL356379.1-201ENST00000414105 126 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 AC025518.1-201ENST00000479856 347 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 RPS27P21-201ENST00000486977 252 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 AC234781.5-201ENST00000508429 271 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 AC007012.1-201ENST00000567192 175 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 AC034105.4-201ENST00000568304 277 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 uc_338.1-201ENST00000612113 180 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 AL121772.2-201ENST00000614331 297 ntBASIC3.63□□□□□ -1.83
RTN4Q9NQC3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3.63□□□□□ -1.83
RTN4Q9NQC3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RTN4Q9NQC3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4Q9NQC3 SNORA22.1-201ENST00000362701 134 ntBASIC3.62□□□□□ -1.83
RTN4Q9NQC3 MIR200C-201ENST00000384980 68 ntBASIC3.62□□□□□ -1.83
RTN4Q9NQC3 SNORD88.1-201ENST00000408684 91 ntBASIC3.62□□□□□ -1.83
RTN4Q9NQC3 RNA5SP229-201ENST00000410809 99 ntBASIC3.62□□□□□ -1.83
RTN4Q9NQC3 MIR3935-201ENST00000583472 104 ntBASIC3.62□□□□□ -1.83
RTN4Q9NQC3 AC009093.8-201ENST00000641769 292 ntBASIC3.62□□□□□ -1.83
RTN4Q9NQC3 RNU4-35P-201ENST00000362588 141 ntBASIC3.61□□□□□ -1.83
RTN4Q9NQC3 HSPE1P24-201ENST00000450782 238 ntBASIC3.61□□□□□ -1.83
RTN4Q9NQC3 SNORA84-201ENST00000459229 133 ntBASIC3.61□□□□□ -1.83
RTN4Q9NQC3 RNU7-113P-201ENST00000459273 62 ntBASIC3.61□□□□□ -1.83
RTN4Q9NQC3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.61□□□□□ -1.83
RTN4Q9NQC3 AC009831.4-201ENST00000620744 325 ntBASIC3.61□□□□□ -1.83
RTN4Q9NQC3 MIR8063-201ENST00000621930 81 ntBASIC3.61□□□□□ -1.83
RTN4Q9NQC3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RTN4Q9NQC3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.6□□□□□ -1.83
RTN4Q9NQC3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.6□□□□□ -1.83
RTN4Q9NQC3 RN7SL542P-201ENST00000467147 294 ntBASIC3.6□□□□□ -1.83
RTN4Q9NQC3 RNU2-35P-201ENST00000516446 142 ntBASIC3.6□□□□□ -1.83
RTN4Q9NQC3 RNU6-922P-201ENST00000516753 99 ntBASIC3.6□□□□□ -1.83
RTN4Q9NQC3 RNU6-250P-201ENST00000516958 103 ntBASIC3.6□□□□□ -1.83
RTN4Q9NQC3 HSPE1P19-201ENST00000603327 295 ntBASIC3.6□□□□□ -1.83
RTN4Q9NQC3 POLR2J4-204ENST00000418424 324 ntBASIC3.59□□□□□ -1.83
RTN4Q9NQC3 AL139132.1-201ENST00000431587 344 ntBASIC3.59□□□□□ -1.83
RTN4Q9NQC3 AL096840.1-201ENST00000603287 93 ntBASIC3.59□□□□□ -1.83
RTN4Q9NQC3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.59□□□□□ -1.84
RTN4Q9NQC3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RTN4Q9NQC3 Y_RNA.35-201ENST00000362601 101 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 Y_RNA.49-201ENST00000362714 112 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 Y_RNA.281-201ENST00000364774 94 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 RNY4P18-201ENST00000391107 89 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 RPL30P7-201ENST00000479312 323 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 AC079140.2-201ENST00000506193 142 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 AC004812.1-201ENST00000540773 146 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 CYP3A52P-201ENST00000563326 91 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 MIR6841-201ENST00000637129 72 ntBASIC3.58□□□□□ -1.84
RTN4Q9NQC3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN4Q9NQC3 AL589743.1-201ENST00000551932 2712 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms