Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNU6-443P-201ENST00000384780 107 ntBASIC3.15□□□□□ -1.91
EFCC1Q9HA90 AL591806.2-201ENST00000433122 173 ntBASIC3.15□□□□□ -1.91
EFCC1Q9HA90 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
EFCC1Q9HA90 RPL39P25-201ENST00000449384 154 ntBASIC3.15□□□□□ -1.91
EFCC1Q9HA90 AL358944.1-201ENST00000528537 144 ntBASIC3.15□□□□□ -1.91
EFCC1Q9HA90 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.15□□□□□ -1.91
EFCC1Q9HA90 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
EFCC1Q9HA90 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.14□□□□□ -1.91
EFCC1Q9HA90 RNU6-461P-201ENST00000364195 107 ntBASIC3.14□□□□□ -1.91
EFCC1Q9HA90 RNU6-573P-201ENST00000383938 106 ntBASIC3.14□□□□□ -1.91
EFCC1Q9HA90 RNU7-6P-201ENST00000516845 62 ntBASIC3.14□□□□□ -1.91
EFCC1Q9HA90 AC084364.2-201ENST00000546924 395 ntBASIC3.14□□□□□ -1.91
EFCC1Q9HA90 AC006441.5-201ENST00000612680 209 ntBASIC3.14□□□□□ -1.91
EFCC1Q9HA90 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.14□□□□□ -1.91
EFCC1Q9HA90 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
EFCC1Q9HA90 SNORD115-3-201ENST00000363100 82 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 MIR764-201ENST00000390811 85 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 RNA5SP425-201ENST00000410336 112 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 SUMO1P4-201ENST00000429430 302 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 RNU1-131P-201ENST00000458943 161 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 AP003484.1-201ENST00000530974 250 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 MIR4446-201ENST00000578505 67 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 MIR4648-201ENST00000580107 72 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 AC002984.1-201ENST00000591692 448 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 AL513534.2-201ENST00000603836 250 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 AL442128.1-201ENST00000615151 90 ntBASIC3.13□□□□□ -1.91
EFCC1Q9HA90 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.13□□□□□ -1.91
EFCC1Q9HA90 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EFCC1Q9HA90 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
EFCC1Q9HA90 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 MIR548D2-201ENST00000384955 97 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 RNU6-220P-201ENST00000390919 107 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 AL353689.1-201ENST00000438895 199 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 RNU7-94P-201ENST00000459576 63 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 MIR4305-201ENST00000583252 102 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 AL449363.1-201ENST00000617815 186 ntBASIC3.12□□□□□ -1.91
EFCC1Q9HA90 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EFCC1Q9HA90 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
EFCC1Q9HA90 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EFCC1Q9HA90 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.11□□□□□ -1.91
EFCC1Q9HA90 RNA5SP289-201ENST00000362332 137 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 SNORA25B-201ENST00000365507 128 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 Y_RNA.440-201ENST00000384120 114 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 SNORA80E-201ENST00000384744 137 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 RNU4-53P-201ENST00000410828 140 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 RNA5SP247-201ENST00000411181 105 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.11□□□□□ -1.91
EFCC1Q9HA90 MTATP8P2-201ENST00000435212 202 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 RNU6-548P-201ENST00000517083 115 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 ZNF861P-201ENST00000588126 639 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 SNORD115-40-201ENST00000606510 82 ntBASIC3.11□□□□□ -1.91
EFCC1Q9HA90 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EFCC1Q9HA90 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
EFCC1Q9HA90 MIR494-201ENST00000349529 81 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 RNU6-1134P-201ENST00000365156 101 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 MIR1289-2-201ENST00000408360 111 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 RNU6-938P-201ENST00000411285 103 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 AL606517.2-201ENST00000442855 241 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 RNU2-35P-201ENST00000516446 142 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 RNU6-1116P-201ENST00000517269 99 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 MIR3163-201ENST00000581592 73 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 MALAT1.1-201ENST00000618249 95 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 MIR1245B-201ENST00000636115 69 ntBASIC3.1□□□□□ -1.91
EFCC1Q9HA90 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EFCC1Q9HA90 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
EFCC1Q9HA90 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.09□□□□□ -1.91
EFCC1Q9HA90 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFCC1Q9HA90 RNU6-160P-201ENST00000384591 107 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 RNU6-816P-201ENST00000390914 107 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 RNA5SP109-201ENST00000391010 116 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 RNU6-1268P-201ENST00000391214 107 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 RNU6-1239P-201ENST00000391310 107 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 MIR1262-201ENST00000408276 93 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.09□□□□□ -1.91
EFCC1Q9HA90 AC245047.3-201ENST00000429428 127 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 PGBD4P5-201ENST00000445958 426 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 AC091932.4-201ENST00000623386 200 ntBASIC3.09□□□□□ -1.91
EFCC1Q9HA90 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFCC1Q9HA90 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
EFCC1Q9HA90 AP000648.3-201ENST00000623539 4507 ntBASIC3.09□□□□□ -1.92
EFCC1Q9HA90 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.08□□□□□ -1.92
EFCC1Q9HA90 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFCC1Q9HA90 RNU7-80P-201ENST00000459562 61 ntBASIC3.08□□□□□ -1.92
EFCC1Q9HA90 AC003982.1-202ENST00000469928 248 ntBASIC3.08□□□□□ -1.92
EFCC1Q9HA90 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.08□□□□□ -1.92
EFCC1Q9HA90 MIR5194-201ENST00000582634 120 ntBASIC3.08□□□□□ -1.92
EFCC1Q9HA90 AL353149.1-201ENST00000610667 244 ntBASIC3.08□□□□□ -1.92
EFCC1Q9HA90 Y_RNA.818-201ENST00000618813 71 ntBASIC3.08□□□□□ -1.92
EFCC1Q9HA90 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFCC1Q9HA90 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
EFCC1Q9HA90 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
EFCC1Q9HA90 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EFCC1Q9HA90 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
EFCC1Q9HA90 Y_RNA.99-201ENST00000363138 105 ntBASIC3.07□□□□□ -1.92
EFCC1Q9HA90 RNU6-163P-201ENST00000384396 106 ntBASIC3.07□□□□□ -1.92
EFCC1Q9HA90 SRIP3-201ENST00000413200 219 ntBASIC3.07□□□□□ -1.92
EFCC1Q9HA90 SNRPGP14-201ENST00000435400 219 ntBASIC3.07□□□□□ -1.92
EFCC1Q9HA90 STAG3L5P-204ENST00000443759 179 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms