Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 Z96811.1-201ENST00000445880 108 ntBASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 SCARNA15-202ENST00000516881 127 ntBASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 AC022202.1-201ENST00000613515 211 ntBASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00116Q8NCU8 RNU6-880P-201ENST00000384526 107 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 Y_RNA.528-201ENST00000384575 108 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 RNA5SP109-201ENST00000391010 116 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 AL606517.2-201ENST00000442855 241 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 RNU7-25P-201ENST00000516544 62 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 SNORD45.4-201ENST00000516629 73 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 RNU6-113P-201ENST00000516653 101 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 MIR5197-201ENST00000583721 112 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 MIR4762-201ENST00000585261 75 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 AC006441.5-201ENST00000612680 209 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 AC134878.1-201ENST00000619901 243 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 MIR376A2-201ENST00000636782 80 ntBASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LINC00116Q8NCU8 RNU6-268P-201ENST00000364174 107 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 U8.5-201ENST00000364528 136 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 U8.9-201ENST00000365667 134 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 RNU6-147P-201ENST00000383983 107 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 RNA5SP482-201ENST00000391269 118 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 MIR3613-201ENST00000579844 87 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 MIR4781-201ENST00000585250 76 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LINC00116Q8NCU8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 AC008555.8-201ENST00000623602 2168 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 SNORA2.2-201ENST00000365473 135 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 Y_RNA.366-201ENST00000365540 102 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 RNU6-1189P-201ENST00000383958 107 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 Y_RNA.410-201ENST00000383992 113 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 RPL23AP63-201ENST00000498752 471 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 MIR4679-2-201ENST00000578358 77 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 SNRPGP19-201ENST00000603826 189 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 AL137067.1-201ENST00000615933 120 ntBASIC2.59□□□□□ -1.99
LINC00116Q8NCU8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
LINC00116Q8NCU8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC00116Q8NCU8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LINC00116Q8NCU8 SNORD115-28-201ENST00000363931 81 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 Y_RNA.547-201ENST00000384654 119 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 CALM2P4-201ENST00000430810 426 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 AC003989.2-201ENST00000440224 169 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.58□□□□□ -2
LINC00116Q8NCU8 RNA5SP182-201ENST00000516064 82 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 RNU7-28P-201ENST00000516759 62 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 MIR3126-201ENST00000577443 74 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 AC022513.1-201ENST00000624512 117 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
LINC00116Q8NCU8 RNU1-58P-201ENST00000362413 163 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 Y_RNA.37-201ENST00000362606 108 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 MIR29C-201ENST00000385231 88 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 AC019129.1-201ENST00000403786 261 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 STAG3L5P-204ENST00000443759 179 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.57□□□□□ -2
LINC00116Q8NCU8 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 AC005786.1-201ENST00000588553 154 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
LINC00116Q8NCU8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC00116Q8NCU8 RNU6-457P-201ENST00000363999 107 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 Y_RNA.336-201ENST00000365307 109 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 RNA5SP136-201ENST00000410906 107 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.56□□□□□ -2
LINC00116Q8NCU8 BX510359.4-201ENST00000423750 193 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 SNRPGP14-201ENST00000435400 219 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
LINC00116Q8NCU8 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 RNU6-240P-201ENST00000516098 97 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 RNU7-70P-201ENST00000516941 66 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 AC084364.2-201ENST00000546924 395 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 MIR5002-201ENST00000584713 97 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 MIR8054-201ENST00000620877 86 ntBASIC2.56□□□□□ -2
LINC00116Q8NCU8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.56□□□□□ -2
LINC00116Q8NCU8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LINC00116Q8NCU8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00116Q8NCU8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.55□□□□□ -2
LINC00116Q8NCU8 SNORD36C-201ENST00000516733 66 ntBASIC2.55□□□□□ -2
LINC00116Q8NCU8 snoU13.31-201ENST00000607291 104 ntBASIC2.55□□□□□ -2
LINC00116Q8NCU8 AC015726.2-201ENST00000620112 122 ntBASIC2.55□□□□□ -2
LINC00116Q8NCU8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
LINC00116Q8NCU8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00116Q8NCU8 RNU6-1298P-201ENST00000362456 101 ntBASIC2.54□□□□□ -2
LINC00116Q8NCU8 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
LINC00116Q8NCU8 RNU6-163P-201ENST00000384396 106 ntBASIC2.54□□□□□ -2
LINC00116Q8NCU8 MIR1287-201ENST00000408492 90 ntBASIC2.54□□□□□ -2
LINC00116Q8NCU8 HMGN2P32-201ENST00000444648 269 ntBASIC2.54□□□□□ -2
LINC00116Q8NCU8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.54□□□□□ -2
LINC00116Q8NCU8 AC114811.1-201ENST00000507207 168 ntBASIC2.54□□□□□ -2
LINC00116Q8NCU8 RNU6-1116P-201ENST00000517269 99 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms