Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 SNORA26-201ENST00000391286 122 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 MIR4498-201ENST00000577599 66 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 MIR3618-201ENST00000580330 88 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 AL357312.1-201ENST00000603879 298 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 Pinc.1-201ENST00000616452 154 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 MIR378A-201ENST00000362177 66 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-379P-201ENST00000363813 104 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 BTF3P4-201ENST00000418852 495 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 AC015922.2-201ENST00000435593 184 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-917P-201ENST00000516294 104 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 AC024614.2-201ENST00000577584 372 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 FAM106DP-201ENST00000586416 501 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 AC009779.6-201ENST00000603972 165 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 AL121890.5-201ENST00000620848 304 ntBASIC1.93□□□□□ -2.1
PRPF38AQ8NAV1 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
PRPF38AQ8NAV1 AP001485.1-201ENST00000604799 199 ntBASIC1.92□□□□□ -2.1
PRPF38AQ8NAV1 AC006441.5-201ENST00000612680 209 ntBASIC1.92□□□□□ -2.1
PRPF38AQ8NAV1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.83-201ENST00000363005 113 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 SNORD72-201ENST00000390994 80 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 AC245047.8-201ENST00000456455 284 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-922P-201ENST00000516753 99 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Z83818.1-201ENST00000603584 150 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.91□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.7-201ENST00000362352 102 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-268P-201ENST00000364174 107 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 snoU2_19.4-201ENST00000364329 80 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 AL606845.1-201ENST00000404881 255 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-847P-201ENST00000411115 108 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 AC108729.3-201ENST00000513484 108 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 AC090142.3-201ENST00000519012 385 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 AL512310.8-201ENST00000550183 120 ntBASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PRPF38AQ8NAV1 MIR526A1-201ENST00000384897 85 ntBASIC1.89□□□□□ -2.11
PRPF38AQ8NAV1 SNORA79-201ENST00000408376 140 ntBASIC1.89□□□□□ -2.11
PRPF38AQ8NAV1 AP1B1P2-201ENST00000416196 106 ntBASIC1.89□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-830P-201ENST00000516353 107 ntBASIC1.89□□□□□ -2.11
PRPF38AQ8NAV1 snoU13.31-201ENST00000607291 104 ntBASIC1.89□□□□□ -2.11
PRPF38AQ8NAV1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-728P-201ENST00000365375 104 ntBASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-493P-201ENST00000391321 108 ntBASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 SNRPGP14-201ENST00000435400 219 ntBASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-365P-201ENST00000517113 106 ntBASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 MIR4744-201ENST00000581563 82 ntBASIC1.88□□□□□ -2.11
PRPF38AQ8NAV1 MIR411-201ENST00000362239 96 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 RNA5SP153-201ENST00000516498 76 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-388P-201ENST00000517012 105 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-389P-201ENST00000517048 105 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 SNORD53B-201ENST00000577887 78 ntBASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.87□□□□□ -2.11
PRPF38AQ8NAV1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RNU4-70P-201ENST00000384579 139 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RNU2-70P-201ENST00000410718 179 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RPL39P39-201ENST00000455840 151 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 SCARNA8-201ENST00000515924 131 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-970P-201ENST00000516312 107 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 MIR3664-201ENST00000579074 99 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-1020P-201ENST00000363684 107 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-923P-201ENST00000364753 107 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 MT-TT-201ENST00000387460 66 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 SNRPGP13-201ENST00000442212 177 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 RNY3P16-201ENST00000516338 101 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-504P-201ENST00000516568 104 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 RNU6-453P-201ENST00000516819 85 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 SNORA74.3-201ENST00000517108 154 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 AL160236.1-201ENST00000556317 195 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
PRPF38AQ8NAV1 SNORD24-201ENST00000383884 75 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 Y_RNA.435-201ENST00000384095 112 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 Y_RNA.571-201ENST00000384753 98 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 Y_RNA.797-201ENST00000515977 94 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 CYP3A52P-201ENST00000563326 91 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 AC078938.1-201ENST00000620993 318 ntBASIC1.84□□□□□ -2.11
PRPF38AQ8NAV1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.12
PRPF38AQ8NAV1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms