Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL138878.1-201ENST00000405131 347 ntBASIC3.92□□□□□ -1.78
NUBP1P53384 HDGFP1-201ENST00000405943 252 ntBASIC3.92□□□□□ -1.78
NUBP1P53384 MIR4500-201ENST00000579472 76 ntBASIC3.92□□□□□ -1.78
NUBP1P53384 MIR4536-1-201ENST00000583537 88 ntBASIC3.92□□□□□ -1.78
NUBP1P53384 AL357312.1-201ENST00000603879 298 ntBASIC3.92□□□□□ -1.78
NUBP1P53384 MIR7851-201ENST00000610611 160 ntBASIC3.92□□□□□ -1.78
NUBP1P53384 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NUBP1P53384 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUBP1P53384 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
NUBP1P53384 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 RNU1-91P-201ENST00000364746 163 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 RNU6-571P-201ENST00000384128 107 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 RNU4-83P-201ENST00000410863 133 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 snoU13.27-201ENST00000459278 104 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 AC025445.1-201ENST00000502728 300 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 RNU7-143P-201ENST00000516781 65 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 RNU6-850P-201ENST00000516934 103 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 U6.98-201ENST00000637157 84 ntBASIC3.91□□□□□ -1.78
NUBP1P53384 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUBP1P53384 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
NUBP1P53384 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUBP1P53384 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUBP1P53384 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUBP1P53384 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUBP1P53384 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NUBP1P53384 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUBP1P53384 MIR424-201ENST00000362227 98 ntBASIC3.9□□□□□ -1.79
NUBP1P53384 RNA5SP51-201ENST00000364750 119 ntBASIC3.9□□□□□ -1.79
NUBP1P53384 MIR597-201ENST00000384968 97 ntBASIC3.9□□□□□ -1.79
NUBP1P53384 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NUBP1P53384 SNORD77.2-201ENST00000391045 68 ntBASIC3.9□□□□□ -1.79
NUBP1P53384 MIR8058-201ENST00000615737 89 ntBASIC3.9□□□□□ -1.79
NUBP1P53384 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUBP1P53384 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUBP1P53384 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUBP1P53384 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUBP1P53384 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.89□□□□□ -1.79
NUBP1P53384 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUBP1P53384 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUBP1P53384 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUBP1P53384 SNORD35B-201ENST00000363660 87 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 RNU6-949P-201ENST00000384040 107 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 MIR1265-201ENST00000408444 86 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 AC005326.1-201ENST00000429197 123 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 MIR4325-201ENST00000583049 90 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 MIR3935-201ENST00000583472 104 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 AL662814.1-201ENST00000617364 121 ntBASIC3.89□□□□□ -1.79
NUBP1P53384 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUBP1P53384 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUBP1P53384 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.89□□□□□ -1.79
NUBP1P53384 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUBP1P53384 AC093908.1-201ENST00000623125 8092 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.88□□□□□ -1.79
NUBP1P53384 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.88□□□□□ -1.79
NUBP1P53384 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUBP1P53384 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUBP1P53384 AL356274.2-201ENST00000624379 3752 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NUBP1P53384 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUBP1P53384 RNU5F-1-201ENST00000362507 117 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 MIR2114-201ENST00000516645 80 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 MIR548AO-201ENST00000579992 96 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 MIR4484-201ENST00000582855 83 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.88□□□□□ -1.79
NUBP1P53384 AC022202.1-201ENST00000613515 211 ntBASIC3.88□□□□□ -1.79
NUBP1P53384 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NUBP1P53384 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NUBP1P53384 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUBP1P53384 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUBP1P53384 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUBP1P53384 RNA5SP399-201ENST00000364003 117 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NUBP1P53384 Z98941.1-201ENST00000407764 100 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 MIR1251-201ENST00000408552 70 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 AC023790.1-201ENST00000482174 347 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 RNU6-687P-201ENST00000516443 89 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 AC104984.5-201ENST00000586878 94 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 MIR4251-201ENST00000635819 61 ntBASIC3.87□□□□□ -1.79
NUBP1P53384 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUBP1P53384 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUBP1P53384 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NUBP1P53384 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUBP1P53384 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUBP1P53384 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUBP1P53384 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUBP1P53384 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUBP1P53384 MIR199A2-201ENST00000385289 110 ntBASIC3.86□□□□□ -1.79
NUBP1P53384 SNORA18.5-201ENST00000516616 101 ntBASIC3.86□□□□□ -1.79
NUBP1P53384 MIR4727-201ENST00000622232 55 ntBASIC3.86□□□□□ -1.79
NUBP1P53384 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUBP1P53384 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUBP1P53384 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms