Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PRIM1P49642 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.86□□□□□ -1.79
PRIM1P49642 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PRIM1P49642 RNU6-1296P-201ENST00000383879 107 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 RNU6-950P-201ENST00000384651 107 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 RNU6-887P-201ENST00000410660 100 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 AC087499.2-201ENST00000432861 149 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 AC069257.2-201ENST00000441819 155 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 UBL5P3-201ENST00000475112 231 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 TRBV12-1-201ENST00000479785 344 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 RPL23AP63-201ENST00000498752 471 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 HSPE1P19-201ENST00000603327 295 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 AC007318.2-201ENST00000620999 243 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 MIR1255B1-201ENST00000636325 63 ntBASIC3.86□□□□□ -1.79
PRIM1P49642 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PRIM1P49642 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.86□□□□□ -1.79
PRIM1P49642 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PRIM1P49642 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PRIM1P49642 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PRIM1P49642 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.85□□□□□ -1.79
PRIM1P49642 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRIM1P49642 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.85□□□□□ -1.79
PRIM1P49642 RNU6-862P-201ENST00000362804 105 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 Y_RNA.95-201ENST00000363079 95 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 SNORD114-6-201ENST00000364393 72 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 RNU6-851P-201ENST00000384565 107 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 RNU6-279P-201ENST00000391297 101 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 AC114811.1-201ENST00000507207 168 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 U4atac.1-201ENST00000618345 95 ntBASIC3.85□□□□□ -1.79
PRIM1P49642 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.85□□□□□ -1.79
PRIM1P49642 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PRIM1P49642 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRIM1P49642 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRIM1P49642 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRIM1P49642 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRIM1P49642 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRIM1P49642 SNORA25.6-201ENST00000364121 118 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 RNU6-1319P-201ENST00000390855 104 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 RNU6-747P-201ENST00000390928 104 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 RNU6-241P-201ENST00000391148 104 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 MIR1267-201ENST00000408723 78 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 RNA5SP225-201ENST00000410874 135 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 RNU6-177P-201ENST00000411257 104 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 POLR2J4-204ENST00000418424 324 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 RNA5SP380-201ENST00000517190 98 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.84□□□□□ -1.79
PRIM1P49642 Y_RNA.773-201ENST00000607168 90 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.84□□□□□ -1.79
PRIM1P49642 AC093831.2-201ENST00000624393 3427 ntBASIC3.84□□□□□ -1.8
PRIM1P49642 MAPK10-362ENST00000641864 4484 ntBASIC3.84□□□□□ -1.8
PRIM1P49642 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRIM1P49642 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.83□□□□□ -1.8
PRIM1P49642 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRIM1P49642 RNU6-497P-201ENST00000365316 104 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRIM1P49642 RNU6-1072P-201ENST00000384703 107 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 RNU6-443P-201ENST00000384780 107 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 SNORD109B-201ENST00000458961 67 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 SNORD109A-201ENST00000459128 67 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 RNU7-53P-201ENST00000516705 60 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 SNORA50A-202ENST00000629536 136 ntBASIC3.83□□□□□ -1.8
PRIM1P49642 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRIM1P49642 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRIM1P49642 SNORD116-10-201ENST00000363791 102 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 Y_RNA.426-201ENST00000384068 113 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 RNU7-171P-201ENST00000459581 62 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 RPS29P12-201ENST00000460178 152 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 Y_RNA.659-201ENST00000515994 113 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 AC095038.3-201ENST00000634439 195 ntBASIC3.82□□□□□ -1.8
PRIM1P49642 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRIM1P49642 AL442644.1-201ENST00000454390 3105 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRIM1P49642 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRIM1P49642 RNU6-979P-201ENST00000383896 107 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 RNU6-1201P-201ENST00000384227 107 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 MIR605-201ENST00000385078 83 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 RNA5SP508-201ENST00000411327 119 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 AC015922.2-201ENST00000435593 184 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 STAG3L5P-204ENST00000443759 179 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 RN7SL75P-201ENST00000461926 281 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 RN7SL20P-201ENST00000488827 297 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 RNU6-162P-201ENST00000516228 103 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 MIR4666B-201ENST00000578142 81 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 MIR5588-201ENST00000581890 63 ntBASIC3.81□□□□□ -1.8
PRIM1P49642 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.81□□□□□ -1.8
PRIM1P49642 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRIM1P49642 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRIM1P49642 AC092881.1-201ENST00000638218 2733 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.8□□□□□ -1.8
PRIM1P49642 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.8□□□□□ -1.8
PRIM1P49642 RNU6-833P-201ENST00000363486 107 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 Y_RNA.244-201ENST00000364484 109 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 SNORD115-35-201ENST00000365122 82 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 MIR196B-201ENST00000384852 84 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 SNORA7.5-201ENST00000410672 110 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 AC019288.1-201ENST00000557918 224 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 MIR4777-201ENST00000583710 86 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 MIR8054-201ENST00000620877 86 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms