Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 RNU4-82P-201ENST00000362443 140 ntBASIC3.35□□□□□ -1.87
ITGA6P23229 U8.5-201ENST00000364528 136 ntBASIC3.35□□□□□ -1.87
ITGA6P23229 Y_RNA.316-201ENST00000365118 111 ntBASIC3.35□□□□□ -1.87
ITGA6P23229 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ITGA6P23229 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ITGA6P23229 U8.15-201ENST00000390947 134 ntBASIC3.35□□□□□ -1.87
ITGA6P23229 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
ITGA6P23229 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.35□□□□□ -1.87
ITGA6P23229 UCA1.1-201ENST00000620952 75 ntBASIC3.35□□□□□ -1.87
ITGA6P23229 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ITGA6P23229 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
ITGA6P23229 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ITGA6P23229 AC008264.2-201ENST00000610193 3731 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 RNU6-546P-201ENST00000383991 107 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 RNU4-69P-201ENST00000410677 143 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 SNORA31.4-201ENST00000516049 129 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 RNU6-1006P-201ENST00000516998 103 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
ITGA6P23229 AC021613.1-201ENST00000623880 111 ntBASIC3.34□□□□□ -1.87
ITGA6P23229 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ITGA6P23229 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ITGA6P23229 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
ITGA6P23229 Y_RNA.336-201ENST00000365307 109 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 RNU6-1083P-201ENST00000384022 107 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 Y_RNA.430-201ENST00000384081 110 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 POLR2J4-204ENST00000418424 324 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.33□□□□□ -1.88
ITGA6P23229 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 SNORD45.4-201ENST00000516629 73 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 RNU1-142P-201ENST00000516682 145 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 MIR4439-201ENST00000583746 80 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 AC096720.1-201ENST00000604441 183 ntBASIC3.33□□□□□ -1.88
ITGA6P23229 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ITGA6P23229 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ITGA6P23229 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ITGA6P23229 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
ITGA6P23229 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
ITGA6P23229 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ITGA6P23229 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ITGA6P23229 ICE2P2-201ENST00000483823 2787 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 RNU6-633P-201ENST00000362612 103 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 RNA5SP68-201ENST00000363885 119 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 RNU6-616P-201ENST00000384353 107 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.32□□□□□ -1.88
ITGA6P23229 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 RNU6-991P-201ENST00000516168 107 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 MIR338-201ENST00000636369 67 ntBASIC3.32□□□□□ -1.88
ITGA6P23229 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.32□□□□□ -1.88
ITGA6P23229 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ITGA6P23229 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ITGA6P23229 RNU6-301P-201ENST00000384277 107 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 SNORA27-201ENST00000384323 126 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 Y_RNA.565-201ENST00000384719 101 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 SNORA80E-201ENST00000384744 137 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.31□□□□□ -1.88
ITGA6P23229 RNU6-998P-201ENST00000515894 101 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 SCARNA3-201ENST00000517097 143 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 MIR3605-201ENST00000583214 100 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 MIR6817-201ENST00000615588 66 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 AL512310.12-203ENST00000640543 90 ntBASIC3.31□□□□□ -1.88
ITGA6P23229 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
ITGA6P23229 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ITGA6P23229 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.3□□□□□ -1.88
ITGA6P23229 RNU6-1313P-201ENST00000362622 102 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 SNORD77B-201ENST00000391112 67 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RNU7-113P-201ENST00000459273 62 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RNU7-94P-201ENST00000459576 63 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RN7SL429P-201ENST00000479090 223 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RN7SL489P-201ENST00000486185 223 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RN7SL327P-201ENST00000488659 223 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 SCARNA17.1-201ENST00000516211 143 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RNU6-1041P-201ENST00000516254 102 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 SCARNA17.2-201ENST00000516334 143 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 SCARNA17.4-201ENST00000614296 143 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 RN7SL853P-201ENST00000617250 223 ntBASIC3.3□□□□□ -1.88
ITGA6P23229 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ITGA6P23229 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ITGA6P23229 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ITGA6P23229 Y_RNA.171-201ENST00000363760 102 ntBASIC3.29□□□□□ -1.88
ITGA6P23229 SNORA1.1-201ENST00000364671 133 ntBASIC3.29□□□□□ -1.88
ITGA6P23229 RNU7-96P-201ENST00000459535 64 ntBASIC3.29□□□□□ -1.88
ITGA6P23229 RNA5SP148-201ENST00000516527 94 ntBASIC3.29□□□□□ -1.88
ITGA6P23229 AC092881.1-201ENST00000638218 2733 ntBASIC3.29□□□□□ -1.88
ITGA6P23229 Y_RNA.241-201ENST00000364470 117 ntBASIC3.28□□□□□ -1.88
ITGA6P23229 RNA5SP323-201ENST00000391094 133 ntBASIC3.28□□□□□ -1.88
ITGA6P23229 AL161788.1-201ENST00000441805 169 ntBASIC3.28□□□□□ -1.88
ITGA6P23229 MIR4712-201ENST00000583750 82 ntBASIC3.28□□□□□ -1.88
ITGA6P23229 MIR376B-201ENST00000614515 100 ntBASIC3.28□□□□□ -1.88
ITGA6P23229 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
ITGA6P23229 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
ITGA6P23229 RNU6-1229P-201ENST00000364295 107 ntBASIC3.27□□□□□ -1.89
ITGA6P23229 SNORA8-201ENST00000384574 139 ntBASIC3.27□□□□□ -1.89
ITGA6P23229 MIR1270-201ENST00000459320 83 ntBASIC3.27□□□□□ -1.89
ITGA6P23229 AC108729.3-201ENST00000513484 108 ntBASIC3.27□□□□□ -1.89
ITGA6P23229 RNA5SP282-201ENST00000516355 108 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms