Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
THBS1P07996 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
THBS1P07996 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.02□□□□□ -1.93
THBS1P07996 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
THBS1P07996 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
THBS1P07996 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.02□□□□□ -1.93
THBS1P07996 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
THBS1P07996 RNU6-833P-201ENST00000363486 107 ntBASIC3.02□□□□□ -1.93
THBS1P07996 RNU6-509P-201ENST00000363519 107 ntBASIC3.02□□□□□ -1.93
THBS1P07996 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.02□□□□□ -1.93
THBS1P07996 AC069257.2-201ENST00000441819 155 ntBASIC3.02□□□□□ -1.93
THBS1P07996 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
THBS1P07996 SNORA31.4-201ENST00000516049 129 ntBASIC3.02□□□□□ -1.93
THBS1P07996 MIR4276-201ENST00000584832 70 ntBASIC3.02□□□□□ -1.93
THBS1P07996 MIR8054-201ENST00000620877 86 ntBASIC3.02□□□□□ -1.93
THBS1P07996 MIR8057-201ENST00000620957 69 ntBASIC3.02□□□□□ -1.93
THBS1P07996 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
THBS1P07996 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
THBS1P07996 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
THBS1P07996 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
THBS1P07996 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
THBS1P07996 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
THBS1P07996 Y_RNA.4-201ENST00000362333 112 ntBASIC3.01□□□□□ -1.93
THBS1P07996 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.01□□□□□ -1.93
THBS1P07996 AL049873.1-201ENST00000480540 376 ntBASIC3.01□□□□□ -1.93
THBS1P07996 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.01□□□□□ -1.93
THBS1P07996 RNU6-1006P-201ENST00000516998 103 ntBASIC3.01□□□□□ -1.93
THBS1P07996 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
THBS1P07996 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
THBS1P07996 MIR4298-201ENST00000584380 73 ntBASIC3.01□□□□□ -1.93
THBS1P07996 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.01□□□□□ -1.93
THBS1P07996 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.01□□□□□ -1.93
THBS1P07996 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
THBS1P07996 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
THBS1P07996 AC245060.5-201ENST00000610778 3293 ntBASIC3.01□□□□□ -1.93
THBS1P07996 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
THBS1P07996 MIRLET7C-201ENST00000362160 84 ntBASIC3□□□□□ -1.93
THBS1P07996 RNA5SP493-201ENST00000364115 91 ntBASIC3□□□□□ -1.93
THBS1P07996 Y_RNA.370-201ENST00000365589 108 ntBASIC3□□□□□ -1.93
THBS1P07996 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
THBS1P07996 RNU6-788P-201ENST00000390967 104 ntBASIC3□□□□□ -1.93
THBS1P07996 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3□□□□□ -1.93
THBS1P07996 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3□□□□□ -1.93
THBS1P07996 RNU1-143P-201ENST00000516296 146 ntBASIC3□□□□□ -1.93
THBS1P07996 RNU7-181P-201ENST00000517234 74 ntBASIC3□□□□□ -1.93
THBS1P07996 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
THBS1P07996 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
THBS1P07996 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
THBS1P07996 U4atac.1-201ENST00000618345 95 ntBASIC3□□□□□ -1.93
THBS1P07996 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
THBS1P07996 MIR548BB-201ENST00000626714 66 ntBASIC3□□□□□ -1.93
THBS1P07996 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3□□□□□ -1.93
THBS1P07996 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
THBS1P07996 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
THBS1P07996 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
THBS1P07996 RNU6-633P-201ENST00000362612 103 ntBASIC2.99□□□□□ -1.93
THBS1P07996 RNU6-23P-201ENST00000363283 107 ntBASIC2.99□□□□□ -1.93
THBS1P07996 RNU6-652P-201ENST00000365488 107 ntBASIC2.99□□□□□ -1.93
THBS1P07996 Y_RNA.470-201ENST00000384307 117 ntBASIC2.99□□□□□ -1.93
THBS1P07996 Y_RNA.494-201ENST00000384432 111 ntBASIC2.99□□□□□ -1.93
THBS1P07996 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
THBS1P07996 RNA5SP109-201ENST00000391010 116 ntBASIC2.99□□□□□ -1.93
THBS1P07996 AL034345.1-201ENST00000407768 123 ntBASIC2.99□□□□□ -1.93
THBS1P07996 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.99□□□□□ -1.93
THBS1P07996 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.99□□□□□ -1.93
THBS1P07996 AL606517.2-201ENST00000442855 241 ntBASIC2.99□□□□□ -1.93
THBS1P07996 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
THBS1P07996 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.99□□□□□ -1.93
THBS1P07996 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
THBS1P07996 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.98□□□□□ -1.93
THBS1P07996 SNORD38.1-201ENST00000363863 68 ntBASIC2.98□□□□□ -1.93
THBS1P07996 MIR452-201ENST00000385020 85 ntBASIC2.98□□□□□ -1.93
THBS1P07996 RN7SKP192-201ENST00000411291 327 ntBASIC2.98□□□□□ -1.93
THBS1P07996 AL445685.2-201ENST00000422551 342 ntBASIC2.98□□□□□ -1.93
THBS1P07996 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
THBS1P07996 RPS29P29-201ENST00000456396 171 ntBASIC2.98□□□□□ -1.93
THBS1P07996 RNU7-67P-201ENST00000459003 62 ntBASIC2.98□□□□□ -1.93
THBS1P07996 RPS29P12-201ENST00000460178 152 ntBASIC2.98□□□□□ -1.93
THBS1P07996 AC139453.2-201ENST00000487255 133 ntBASIC2.98□□□□□ -1.93
THBS1P07996 RNU6-1258P-201ENST00000516911 111 ntBASIC2.98□□□□□ -1.93
THBS1P07996 AC069114.2-201ENST00000604699 304 ntBASIC2.98□□□□□ -1.93
THBS1P07996 MIR7112-201ENST00000616126 65 ntBASIC2.98□□□□□ -1.93
THBS1P07996 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.98□□□□□ -1.93
THBS1P07996 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
THBS1P07996 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
THBS1P07996 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
THBS1P07996 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
THBS1P07996 MAPK10-266ENST00000641066 6555 ntBASIC2.97□□□□□ -1.93
THBS1P07996 RNU7-34P-201ENST00000459394 64 ntBASIC2.97□□□□□ -1.93
THBS1P07996 RNU7-45P-201ENST00000459460 63 ntBASIC2.97□□□□□ -1.93
THBS1P07996 RNU6-1116P-201ENST00000517269 99 ntBASIC2.97□□□□□ -1.93
THBS1P07996 ELOCP29-201ENST00000588193 334 ntBASIC2.97□□□□□ -1.93
THBS1P07996 AC005786.1-201ENST00000588553 154 ntBASIC2.97□□□□□ -1.93
THBS1P07996 MIR376B-201ENST00000614515 100 ntBASIC2.97□□□□□ -1.93
THBS1P07996 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.97□□□□□ -1.93
THBS1P07996 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
THBS1P07996 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
THBS1P07996 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
THBS1P07996 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
THBS1P07996 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms