Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
PROM1O43490 MIR8054-201ENST00000620877 86 ntBASIC2.04□□□□□ -2.08
PROM1O43490 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.04□□□□□ -2.08
PROM1O43490 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PROM1O43490 Y_RNA.66-201ENST00000362862 102 ntBASIC2.03□□□□□ -2.08
PROM1O43490 SNORD14E-201ENST00000364009 85 ntBASIC2.03□□□□□ -2.08
PROM1O43490 Y_RNA.251-201ENST00000364551 99 ntBASIC2.03□□□□□ -2.08
PROM1O43490 snoU2-30.1-201ENST00000365012 70 ntBASIC2.03□□□□□ -2.08
PROM1O43490 MIR539-201ENST00000365690 78 ntBASIC2.03□□□□□ -2.08
PROM1O43490 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
PROM1O43490 RNU2-51P-201ENST00000410708 197 ntBASIC2.03□□□□□ -2.08
PROM1O43490 RNU2-7P-201ENST00000410794 178 ntBASIC2.03□□□□□ -2.08
PROM1O43490 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
PROM1O43490 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
PROM1O43490 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
PROM1O43490 HMGN2P23-201ENST00000456759 269 ntBASIC2.03□□□□□ -2.08
PROM1O43490 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.03□□□□□ -2.08
PROM1O43490 RNU6-313P-201ENST00000516317 112 ntBASIC2.03□□□□□ -2.08
PROM1O43490 RNVU1-2-201ENST00000516326 135 ntBASIC2.03□□□□□ -2.08
PROM1O43490 MIR3129-201ENST00000581095 76 ntBASIC2.03□□□□□ -2.08
PROM1O43490 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
PROM1O43490 AL365222.1-201ENST00000614661 98 ntBASIC2.03□□□□□ -2.08
PROM1O43490 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.03□□□□□ -2.08
PROM1O43490 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PROM1O43490 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.03□□□□□ -2.08
PROM1O43490 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PROM1O43490 SNORD50B-201ENST00000364995 70 ntBASIC2.02□□□□□ -2.09
PROM1O43490 RNU6-442P-201ENST00000383968 104 ntBASIC2.02□□□□□ -2.09
PROM1O43490 SNORD61-201ENST00000384252 73 ntBASIC2.02□□□□□ -2.09
PROM1O43490 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PROM1O43490 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
PROM1O43490 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
PROM1O43490 RNU6-693P-201ENST00000516134 107 ntBASIC2.02□□□□□ -2.09
PROM1O43490 RNU7-28P-201ENST00000516759 62 ntBASIC2.02□□□□□ -2.09
PROM1O43490 RNU6-1234P-201ENST00000516877 103 ntBASIC2.02□□□□□ -2.09
PROM1O43490 AC007751.1-201ENST00000529260 376 ntBASIC2.02□□□□□ -2.09
PROM1O43490 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
PROM1O43490 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PROM1O43490 U8.1-201ENST00000362843 134 ntBASIC2.01□□□□□ -2.09
PROM1O43490 SNORD18B-201ENST00000365659 72 ntBASIC2.01□□□□□ -2.09
PROM1O43490 SNORA1-201ENST00000384107 130 ntBASIC2.01□□□□□ -2.09
PROM1O43490 RNA5SP127-201ENST00000411051 133 ntBASIC2.01□□□□□ -2.09
PROM1O43490 SNRPGP13-201ENST00000442212 177 ntBASIC2.01□□□□□ -2.09
PROM1O43490 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
PROM1O43490 RNU5E-3P-201ENST00000515913 68 ntBASIC2.01□□□□□ -2.09
PROM1O43490 SNORD45.4-201ENST00000516629 73 ntBASIC2.01□□□□□ -2.09
PROM1O43490 AC131055.1-201ENST00000584626 316 ntBASIC2.01□□□□□ -2.09
PROM1O43490 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.01□□□□□ -2.09
PROM1O43490 AP001340.1-201ENST00000624405 217 ntBASIC2.01□□□□□ -2.09
PROM1O43490 Y_RNA.218-201ENST00000364218 104 ntBASIC2□□□□□ -2.09
PROM1O43490 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
PROM1O43490 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
PROM1O43490 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
PROM1O43490 RNU6-163P-201ENST00000384396 106 ntBASIC2□□□□□ -2.09
PROM1O43490 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
PROM1O43490 RN7SKP200-201ENST00000410564 320 ntBASIC2□□□□□ -2.09
PROM1O43490 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2□□□□□ -2.09
PROM1O43490 HSPE1P9-201ENST00000440046 311 ntBASIC2□□□□□ -2.09
PROM1O43490 AC008267.6-201ENST00000441664 139 ntBASIC2□□□□□ -2.09
PROM1O43490 RNU6-479P-201ENST00000516348 105 ntBASIC2□□□□□ -2.09
PROM1O43490 SNORA31.10-201ENST00000516482 106 ntBASIC2□□□□□ -2.09
PROM1O43490 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
PROM1O43490 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
PROM1O43490 MIR4762-201ENST00000585261 75 ntBASIC2□□□□□ -2.09
PROM1O43490 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
PROM1O43490 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2□□□□□ -2.09
PROM1O43490 U7.2-201ENST00000607576 63 ntBASIC2□□□□□ -2.09
PROM1O43490 GS1-279B7.1-204ENST00000641809 378 ntBASIC2□□□□□ -2.09
PROM1O43490 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
PROM1O43490 Y_RNA.71-201ENST00000362892 104 ntBASIC1.99□□□□□ -2.09
PROM1O43490 RNU6-888P-201ENST00000363010 101 ntBASIC1.99□□□□□ -2.09
PROM1O43490 SNORD24-201ENST00000383884 75 ntBASIC1.99□□□□□ -2.09
PROM1O43490 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PROM1O43490 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PROM1O43490 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
PROM1O43490 MIR548O-201ENST00000408583 114 ntBASIC1.99□□□□□ -2.09
PROM1O43490 RNA5SP501-201ENST00000410990 112 ntBASIC1.99□□□□□ -2.09
PROM1O43490 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
PROM1O43490 RNU6-1333P-201ENST00000516162 93 ntBASIC1.99□□□□□ -2.09
PROM1O43490 Y_RNA.686-201ENST00000516548 134 ntBASIC1.99□□□□□ -2.09
PROM1O43490 Y_RNA.757-201ENST00000578934 114 ntBASIC1.99□□□□□ -2.09
PROM1O43490 AL365205.2-201ENST00000594586 68 ntBASIC1.99□□□□□ -2.09
PROM1O43490 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PROM1O43490 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.99□□□□□ -2.09
PROM1O43490 Y_RNA.164-201ENST00000363709 102 ntBASIC1.98□□□□□ -2.09
PROM1O43490 Y_RNA.261-201ENST00000364631 102 ntBASIC1.98□□□□□ -2.09
PROM1O43490 Y_RNA.294-201ENST00000364916 102 ntBASIC1.98□□□□□ -2.09
PROM1O43490 SNORA4.2-201ENST00000365313 147 ntBASIC1.98□□□□□ -2.09
PROM1O43490 Y_RNA.338-201ENST00000365320 114 ntBASIC1.98□□□□□ -2.09
PROM1O43490 SNORA22C-201ENST00000384614 134 ntBASIC1.98□□□□□ -2.09
PROM1O43490 RNU6-950P-201ENST00000384651 107 ntBASIC1.98□□□□□ -2.09
PROM1O43490 SNORA64-201ENST00000384674 134 ntBASIC1.98□□□□□ -2.09
PROM1O43490 MIR520A-201ENST00000384862 85 ntBASIC1.98□□□□□ -2.09
PROM1O43490 MIR624-201ENST00000385217 97 ntBASIC1.98□□□□□ -2.09
PROM1O43490 MIR676-201ENST00000390702 67 ntBASIC1.98□□□□□ -2.09
PROM1O43490 RNU6-1168P-201ENST00000390831 104 ntBASIC1.98□□□□□ -2.09
PROM1O43490 AL034345.1-201ENST00000407768 123 ntBASIC1.98□□□□□ -2.09
PROM1O43490 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
PROM1O43490 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
PROM1O43490 RNU7-34P-201ENST00000459394 64 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms