Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SNORD46.1-201ENST00000364139 104 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 RNU1-91P-201ENST00000364746 163 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 RNU6-616P-201ENST00000384353 107 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 MIR516B2-201ENST00000385190 85 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 AL353813.1-201ENST00000440700 253 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 RNU2-13P-201ENST00000515909 113 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 RNA5SP137-201ENST00000516833 135 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 MIR3944-201ENST00000581277 108 ntBASIC3.25□□□□□ -1.89
CFAP99D6REC4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.25□□□□□ -1.89
CFAP99D6REC4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CFAP99D6REC4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CFAP99D6REC4 Y_RNA.95-201ENST00000363079 95 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU1-109P-201ENST00000383960 147 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU6-1201P-201ENST00000384227 107 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU6-242P-201ENST00000384359 107 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU11-3P-201ENST00000391111 133 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU6-972P-201ENST00000391208 107 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU7-73P-201ENST00000458743 63 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 Y_RNA.659-201ENST00000515994 113 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU6-162P-201ENST00000516228 103 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 RNU6-1258P-201ENST00000516911 111 ntBASIC3.24□□□□□ -1.89
CFAP99D6REC4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.24□□□□□ -1.89
CFAP99D6REC4 Y_RNA.470-201ENST00000384307 117 ntBASIC3.23□□□□□ -1.89
CFAP99D6REC4 RNU6-1067P-201ENST00000384752 107 ntBASIC3.23□□□□□ -1.89
CFAP99D6REC4 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
CFAP99D6REC4 MIR4777-201ENST00000583710 86 ntBASIC3.23□□□□□ -1.89
CFAP99D6REC4 MIR4439-201ENST00000583746 80 ntBASIC3.23□□□□□ -1.89
CFAP99D6REC4 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
CFAP99D6REC4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CFAP99D6REC4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CFAP99D6REC4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CFAP99D6REC4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
CFAP99D6REC4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CFAP99D6REC4 RNU1-70P-201ENST00000362618 164 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CFAP99D6REC4 MIR520A-201ENST00000384862 85 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 RNA5SP465-201ENST00000391195 109 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 SNORA26.6-201ENST00000391256 115 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 AC022137.1-201ENST00000483735 151 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 RNU6-521P-201ENST00000516663 105 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 AC103810.6-201ENST00000606708 136 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 AC022202.1-201ENST00000613515 211 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 MIR6717-201ENST00000622747 73 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 SNORD3E-202ENST00000627253 216 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 AL512310.12-203ENST00000640543 90 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
CFAP99D6REC4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CFAP99D6REC4 RNU6-1313P-201ENST00000362622 102 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 SNORA1.1-201ENST00000364671 133 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 SNORD116-22-201ENST00000384430 92 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 RNU6-887P-201ENST00000410660 100 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 Z96811.1-201ENST00000445880 108 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 RNU7-34P-201ENST00000459394 64 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.21□□□□□ -1.9
CFAP99D6REC4 AC025521.1-201ENST00000621624 286 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 AL513423.1-201ENST00000621695 132 ntBASIC3.21□□□□□ -1.9
CFAP99D6REC4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.9
CFAP99D6REC4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.21□□□□□ -1.9
CFAP99D6REC4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.2□□□□□ -1.9
CFAP99D6REC4 RNU1-148P-201ENST00000384472 162 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 MIR597-201ENST00000384968 97 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 SNORA11.1-201ENST00000408133 129 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 RNU2-7P-201ENST00000410794 178 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 AC115115.1-201ENST00000449927 248 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 RPL39P39-201ENST00000455840 151 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 AL020996.3-201ENST00000606617 222 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 MIR4791-201ENST00000607666 84 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 AC243994.1-201ENST00000618627 109 ntBASIC3.2□□□□□ -1.9
CFAP99D6REC4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CFAP99D6REC4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
CFAP99D6REC4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CFAP99D6REC4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.19□□□□□ -1.9
CFAP99D6REC4 RNU6-1124P-201ENST00000384169 107 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 RNU6-675P-201ENST00000384236 104 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 BTF3P4-201ENST00000418852 495 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 AC005326.1-201ENST00000429197 123 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.19□□□□□ -1.9
CFAP99D6REC4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.19□□□□□ -1.9
CFAP99D6REC4 MIR548Z-201ENST00000584743 97 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
CFAP99D6REC4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.19□□□□□ -1.9
CFAP99D6REC4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFAP99D6REC4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CFAP99D6REC4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CFAP99D6REC4 SNORA38-201ENST00000363946 132 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 RNVU1-14-201ENST00000384770 164 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 RNU4-47P-201ENST00000410876 114 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 SNORD123-201ENST00000459473 70 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 SCARNA16.3-201ENST00000516595 184 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 RNA5SP481-201ENST00000516814 122 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.18□□□□□ -1.9
CFAP99D6REC4 AC091304.10-201ENST00000641554 121 ntBASIC3.18□□□□□ -1.9
CFAP99D6REC4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms