Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 PGBD4P5-201ENST00000445958 426 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 AC005840.1-201ENST00000498412 377 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-1299P-201ENST00000516316 100 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 SNORD45.4-201ENST00000516629 73 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 AC120024.3-201ENST00000603167 156 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 Pinc.1-201ENST00000616452 154 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-833P-201ENST00000363486 107 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.441-201ENST00000384123 112 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 AL121914.1-201ENST00000450188 156 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-561P-201ENST00000516222 102 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 RNA5SP153-201ENST00000516498 76 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 MIR4431-201ENST00000579990 94 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
PCDHA3Q9Y5H8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.150-201ENST00000363562 102 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 SNORD45.3-201ENST00000363836 72 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-163P-201ENST00000384396 106 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 MIR194-1-201ENST00000384892 85 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 MIR15B-201ENST00000385045 98 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 SNORA26-201ENST00000391286 122 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 RN7SKP51-201ENST00000410781 304 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 JTBP1-201ENST00000441314 247 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 HMGN2P32-201ENST00000444648 269 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 AC114811.1-201ENST00000507207 168 ntBASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA3Q9Y5H8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-414P-201ENST00000363705 104 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 SNORD14E-201ENST00000364009 85 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-442P-201ENST00000383968 104 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 MIR660-201ENST00000385235 97 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 SNORD72-201ENST00000390994 80 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 AL161935.2-201ENST00000414627 60 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 snoU13.15-201ENST00000459407 104 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 AC097639.2-201ENST00000603159 172 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
PCDHA3Q9Y5H8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-203P-201ENST00000384038 104 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 MIR891A-201ENST00000401237 79 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 SNORA79-201ENST00000408376 140 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 RNU7-12P-201ENST00000516030 62 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-197P-201ENST00000516680 100 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 AC103810.8-201ENST00000607347 118 ntBASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PCDHA3Q9Y5H8 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-209P-201ENST00000384118 107 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 Y_RNA.464-201ENST00000384282 110 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 AC004965.1-201ENST00000413033 213 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 SNRPGP14-201ENST00000435400 219 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 AC074198.2-201ENST00000508153 258 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 AC006441.5-201ENST00000612680 209 ntBASIC1.95□□□□□ -2.1
PCDHA3Q9Y5H8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 Y_RNA.357-201ENST00000365487 109 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-643P-201ENST00000384018 107 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 MIR504-201ENST00000385065 83 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 MIR802-201ENST00000390235 94 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 RNU2-70P-201ENST00000410718 179 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-1135P-201ENST00000411083 103 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 SEPT7P4-201ENST00000437076 306 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-365P-201ENST00000517113 106 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 SNORA77B-201ENST00000578179 125 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 SNORD3E-202ENST00000627253 216 ntBASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
PCDHA3Q9Y5H8 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-268P-201ENST00000364174 107 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 RNU4-84P-201ENST00000364200 139 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 RNU6-439P-201ENST00000384188 106 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 RNU5E-9P-201ENST00000411164 104 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
PCDHA3Q9Y5H8 AL442644.1-201ENST00000454390 3105 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms