Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SNORA1.2-201ENST00000365189 134 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 SNORA9-201ENST00000384215 133 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 RNU6-443P-201ENST00000384780 107 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 MIR34C-201ENST00000384831 77 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 MIR206-201ENST00000384872 86 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 RPS29P28-201ENST00000446439 141 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 SNORA74D-201ENST00000516404 141 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 AC005000.2-201ENST00000605468 310 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 MIR8054-201ENST00000620877 86 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 U6.105-201ENST00000637379 88 ntBASIC3.53□□□□□ -1.84
PCDHB3Q9Y5E6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 Y_RNA.370-201ENST00000365589 108 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 Y_RNA.567-201ENST00000384736 106 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 RNU7-67P-201ENST00000459003 62 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 AC090255.1-201ENST00000495779 349 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 AC023141.11-201ENST00000508864 202 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 AC114801.3-201ENST00000510231 177 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 MIR5195-201ENST00000583555 115 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA28-201ENST00000606769 126 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 MIR4791-201ENST00000607666 84 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 MIR7851-201ENST00000610611 160 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 U4atac.1-201ENST00000618345 95 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 MIR7975-201ENST00000619350 68 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 AP000553.6-201ENST00000641242 118 ntBASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB3Q9Y5E6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 AC004223.1-201ENST00000479840 271 ntBASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA50A-202ENST00000629536 136 ntBASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHB3Q9Y5E6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6-315P-201ENST00000362666 107 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 SNORD115-37-201ENST00000363768 82 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6-590P-201ENST00000365039 107 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA48.8-201ENST00000391324 134 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 MIR548G-201ENST00000408442 89 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 CYCSP4-201ENST00000429682 331 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 RPS29P29-201ENST00000456396 171 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 RNU1-98P-201ENST00000458992 160 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6-826P-201ENST00000516827 104 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 AL020996.3-201ENST00000606617 222 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 Z83843.1-201ENST00000604070 3685 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 AC245060.5-201ENST00000610778 3293 ntBASIC3.5□□□□□ -1.85
PCDHB3Q9Y5E6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA68.1-201ENST00000364537 132 ntBASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA24-201ENST00000384096 131 ntBASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 MIR3922-201ENST00000585192 84 ntBASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 SNORD3E-202ENST00000627253 216 ntBASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB3Q9Y5E6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA25B-201ENST00000365507 128 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 RNVU1-14-201ENST00000384770 164 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6-913P-201ENST00000390913 95 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 MIR1262-201ENST00000408276 93 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 AL049873.1-201ENST00000480540 376 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 AC006483.1-201ENST00000487308 313 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 AL513043.2-201ENST00000573941 143 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6-90P-201ENST00000606352 106 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHB3Q9Y5E6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 RNU6-833P-201ENST00000363486 107 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 RNA5SP493-201ENST00000364115 91 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 CD24P4-201ENST00000382840 243 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 RN7SKP111-201ENST00000410349 271 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 SEM1P1-201ENST00000506694 209 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 SNORA31.10-201ENST00000516482 106 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 AC020891.4-201ENST00000605745 93 ntBASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB3Q9Y5E6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHB3Q9Y5E6 SNORD9-201ENST00000362566 104 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-342P-201ENST00000384521 104 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 MIR516B2-201ENST00000385190 85 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms