Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC245047.3-201ENST00000429428 127 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-830P-201ENST00000516353 107 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 SNORA40.13-201ENST00000516379 120 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 AC068339.1-201ENST00000526965 141 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.265-201ENST00000364677 108 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.351-201ENST00000365436 96 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.454-201ENST00000384224 113 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 U8.17-201ENST00000391292 132 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 AL606517.2-201ENST00000442855 241 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 RNU7-164P-201ENST00000459221 62 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 SUMO2P16-201ENST00000519475 264 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 AC024614.2-201ENST00000577584 372 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 MIR3683-201ENST00000580847 82 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN4Q9Y3Q4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.78-201ENST00000362970 110 ntBASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 SNORA3.2-201ENST00000408221 125 ntBASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 MIR1289-2-201ENST00000408360 111 ntBASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 SNORA11.4-201ENST00000408823 129 ntBASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 SNORA18.7-201ENST00000516910 131 ntBASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HCN4Q9Y3Q4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-23P-201ENST00000363283 107 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.355-201ENST00000365462 98 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-851P-201ENST00000384565 107 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 MIR4305-201ENST00000583252 102 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 AC022513.1-201ENST00000624512 117 ntBASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCN4Q9Y3Q4 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 MIR22-201ENST00000362190 85 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-294P-201ENST00000364999 102 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 SNORA51.10-201ENST00000384418 136 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-440P-201ENST00000390882 105 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 AC108729.3-201ENST00000513484 108 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 AC084364.2-201ENST00000546924 395 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 AC026271.5-201ENST00000577873 130 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 MIR8054-201ENST00000620877 86 ntBASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HCN4Q9Y3Q4 AL442644.1-201ENST00000454390 3105 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 SNORD73B-201ENST00000364394 72 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-1104P-201ENST00000384723 104 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 MIR548D2-201ENST00000384955 97 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 RNA5SP109-201ENST00000391010 116 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 RNU7-123P-201ENST00000515911 60 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-844P-201ENST00000517175 102 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 AC005786.1-201ENST00000588553 154 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 SNORA28-201ENST00000606769 126 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.818-201ENST00000618813 71 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 AC015726.2-201ENST00000620112 122 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 AC091932.4-201ENST00000623386 200 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 AC027279.3-201ENST00000625055 122 ntBASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN4Q9Y3Q4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-859P-201ENST00000362728 107 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 Y_RNA.344-201ENST00000365381 112 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 SNORD38C-201ENST00000384381 69 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 MIR7-2-201ENST00000384970 110 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 AC114811.1-201ENST00000507207 168 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 RNU6-970P-201ENST00000516312 107 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 MIR3163-201ENST00000581592 73 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 AC002984.1-201ENST00000591692 448 ntBASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN4Q9Y3Q4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-1019P-201ENST00000364424 107 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 MIR590-201ENST00000385008 97 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 RNA5SP217-201ENST00000515959 91 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-158P-201ENST00000517104 100 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 AC078899.2-201ENST00000595282 212 ntBASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HCN4Q9Y3Q4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms