Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 SNORD68-201ENST00000363214 84 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 SNORD14E-201ENST00000364009 85 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RNU6-268P-201ENST00000364174 107 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RNU1-148P-201ENST00000384472 162 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 MIR802-201ENST00000390235 94 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RPL21P3-201ENST00000395517 478 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 MIR548O-201ENST00000408583 114 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 AL606517.2-201ENST00000442855 241 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 HMGN2P32-201ENST00000444648 269 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RPL23AP42-201ENST00000471152 471 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 AP004217.1-201ENST00000480579 346 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RNU5E-3P-201ENST00000515913 68 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 SNORA31.26-201ENST00000517250 137 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 AC108081.1-201ENST00000604358 221 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 AC025166.1-201ENST00000612411 163 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 AL442644.1-201ENST00000454390 3105 ntBASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIT1Q9Y3P8 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 MIR548A3-201ENST00000385297 97 ntBASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 RPS26P48-201ENST00000491713 339 ntBASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 CYCTP-201ENST00000504253 315 ntBASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 SNORD45.4-201ENST00000516629 73 ntBASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 IGKV1-22-201ENST00000524313 326 ntBASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIT1Q9Y3P8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 RN7SKP123-201ENST00000410732 291 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 RNA5SP136-201ENST00000410906 107 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 AC069257.2-201ENST00000441819 155 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 UBBP3-201ENST00000445497 241 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 RNU6-56P-201ENST00000516986 93 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 AC069114.2-201ENST00000604699 304 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 AC103810.6-201ENST00000606708 136 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 MIR376A2-201ENST00000636782 80 ntBASIC2.44□□□□□ -2.02
SIT1Q9Y3P8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 MIR148B-201ENST00000362252 99 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 RNU6-1084P-201ENST00000362498 107 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 SNORD115-28-201ENST00000363931 81 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 SNORD116-21-201ENST00000384507 92 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 HMGN2P23-201ENST00000456759 269 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 AC004486.1-201ENST00000546846 233 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIT1Q9Y3P8 MTND5P18-201ENST00000445624 1801 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 SNORA63.4-201ENST00000362763 126 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 Y_RNA.265-201ENST00000364677 108 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 RNU6-1189P-201ENST00000383958 107 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 Y_RNA.547-201ENST00000384654 119 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 RNU6-440P-201ENST00000390882 105 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 RNA5SP109-201ENST00000391010 116 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 RNU7-25P-201ENST00000516544 62 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 AC084364.2-201ENST00000546924 395 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 MIR3126-201ENST00000577443 74 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 AL121890.5-201ENST00000620848 304 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 AC027279.3-201ENST00000625055 122 ntBASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SIT1Q9Y3P8 AC093831.2-201ENST00000624393 3427 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 Y_RNA.37-201ENST00000362606 108 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 Y_RNA.338-201ENST00000365320 114 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 RNU6-880P-201ENST00000384526 107 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 RNA5SP210-201ENST00000391034 120 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 AC087499.4-201ENST00000448505 178 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 RNU7-26P-201ENST00000458980 63 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 Y_RNA.649-201ENST00000459077 103 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 AC022202.1-201ENST00000613515 211 ntBASIC2.41□□□□□ -2.02
SIT1Q9Y3P8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.02
SIT1Q9Y3P8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 MIRLET7C-201ENST00000362160 84 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.35-201ENST00000362601 101 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.164-201ENST00000363709 102 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 SNORA22-201ENST00000383907 134 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 MIR1283-2-201ENST00000408621 87 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 BX510359.4-201ENST00000423750 193 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 AL445646.1-201ENST00000431784 216 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms