Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CXXC1Q9P0U4 SNORA63D-201ENST00000364359 132 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 SNORA48.1-201ENST00000390879 135 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP136-201ENST00000410906 107 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 HSPE1P9-201ENST00000440046 311 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3□□□□□ -1.93
CXXC1Q9P0U4 Y_RNA.649-201ENST00000459077 103 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 RN7SL442P-201ENST00000473804 320 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 SNORA18.7-201ENST00000516910 131 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 MTND5P18-201ENST00000445624 1801 ntBASIC3□□□□□ -1.93
CXXC1Q9P0U4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CXXC1Q9P0U4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 RNU6-424P-201ENST00000384367 105 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 MIR1289-2-201ENST00000408360 111 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 AP003484.1-201ENST00000530974 250 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 MIR4648-201ENST00000580107 72 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.99□□□□□ -1.93
CXXC1Q9P0U4 MIRLET7C-201ENST00000362160 84 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 SNORA63.4-201ENST00000362763 126 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 Z98742.3-201ENST00000418637 326 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP217-201ENST00000515959 91 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 RNVU1-2-201ENST00000516326 135 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 SNORD36C-201ENST00000516733 66 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 IGKV1-22-201ENST00000524313 326 ntBASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXXC1Q9P0U4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP289-201ENST00000362332 137 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP99-201ENST00000364020 114 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNU6-880P-201ENST00000384526 107 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 Y_RNA.528-201ENST00000384575 108 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP425-201ENST00000410336 112 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 CALM2P4-201ENST00000430810 426 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNU7-80P-201ENST00000459562 61 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RPS26P48-201ENST00000491713 339 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP458-201ENST00000516188 119 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.97□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP383-201ENST00000362934 120 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 RNU6-833P-201ENST00000363486 107 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 RNU1-133P-201ENST00000364867 167 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 RNU6-690P-201ENST00000365242 106 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 SNORA22-201ENST00000383907 134 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.440-201ENST00000384120 114 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 U8.16-201ENST00000391279 133 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 AL627390.1-201ENST00000396055 340 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 RNU7-34P-201ENST00000459394 64 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 RNU6-240P-201ENST00000516098 97 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 SNORA64.4-201ENST00000516632 81 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 MIR4778-201ENST00000577635 80 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CXXC1Q9P0U4 SNORA25.6-201ENST00000364121 118 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RNU1-51P-201ENST00000365345 176 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RNU7-12P-201ENST00000516030 62 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RNA5SP168-201ENST00000516642 112 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 RNA5SP481-201ENST00000516814 122 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 U1.36-201ENST00000620684 176 ntBASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CXXC1Q9P0U4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.35-201ENST00000362601 101 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 SNORD56.3-201ENST00000363507 71 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 SNORA4.2-201ENST00000365313 147 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.351-201ENST00000365436 96 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 RNU6-805P-201ENST00000365643 106 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 MIR548A1-201ENST00000385041 97 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 RNA5SP501-201ENST00000410990 112 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 AC015922.2-201ENST00000435593 184 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 COX6CP6-201ENST00000490840 228 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 RPL23AP63-201ENST00000498752 471 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 RNA5SP380-201ENST00000517190 98 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 SUB1P4-201ENST00000566062 339 ntBASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXXC1Q9P0U4 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 RNU6-755P-201ENST00000364400 103 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 RNY1P6-201ENST00000384193 109 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 RNU4-53P-201ENST00000410828 140 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 RNU6-938P-201ENST00000411285 103 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms