Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 AP006437.1-201ENST00000641440 3685 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 RNU6-268P-201ENST00000364174 107 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 MIR548A1-201ENST00000385041 97 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 RN7SKP223-201ENST00000410582 62 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 AL591806.2-201ENST00000433122 173 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 RNU7-26P-201ENST00000458980 63 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 AC108210.2-201ENST00000503681 201 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 RNU6-113P-201ENST00000516653 101 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 RNU7-28P-201ENST00000516759 62 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TMEM39AQ9NV64 ICE2P2-201ENST00000483823 2787 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 Y_RNA.410-201ENST00000383992 113 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 MIR1289-2-201ENST00000408360 111 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 BX510359.4-201ENST00000423750 193 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 SNRPGP14-201ENST00000435400 219 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 MIR4635-201ENST00000583759 79 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.84□□□□□ -1.95
TMEM39AQ9NV64 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 SNORD115-28-201ENST00000363931 81 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 Y_RNA.336-201ENST00000365307 109 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 RNU6-1189P-201ENST00000383958 107 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 Y_RNA.547-201ENST00000384654 119 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 MIR181B1-201ENST00000385240 110 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 RNU6-440P-201ENST00000390882 105 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 STAG3L5P-204ENST00000443759 179 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 AC084364.2-201ENST00000546924 395 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 AL137067.1-201ENST00000615933 120 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 MIR8054-201ENST00000620877 86 ntBASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TMEM39AQ9NV64 RNU6-1019P-201ENST00000364424 107 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 SNORA2.2-201ENST00000365473 135 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 RNU1-148P-201ENST00000384472 162 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 RNU6-880P-201ENST00000384526 107 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 Y_RNA.528-201ENST00000384575 108 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 MIR764-201ENST00000390811 85 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 RPPH1-2P-201ENST00000516688 293 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 AC069114.2-201ENST00000604699 304 ntBASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM39AQ9NV64 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 Y_RNA.37-201ENST00000362606 108 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 Y_RNA.366-201ENST00000365540 102 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 AL356320.1-201ENST00000429616 163 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 AL445646.1-201ENST00000431784 216 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 HMGN2P32-201ENST00000444648 269 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 AC004486.1-201ENST00000546846 233 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 MIR5094-201ENST00000578766 85 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.81□□□□□ -1.96
TMEM39AQ9NV64 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 SNORA38-201ENST00000363946 132 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 RNU1-109P-201ENST00000383960 147 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 RNU6-482P-201ENST00000391068 107 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 CALM2P4-201ENST00000430810 426 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 SNORD36C-201ENST00000516733 66 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 SNORA28-201ENST00000606769 126 ntBASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TMEM39AQ9NV64 RNU6-147P-201ENST00000383983 107 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 MIR597-201ENST00000384968 97 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 RNU11-3P-201ENST00000391111 133 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 RNA5SP136-201ENST00000410906 107 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 AC114811.1-201ENST00000507207 168 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 RNU6-1116P-201ENST00000517269 99 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 MIR3613-201ENST00000579844 87 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 AC015726.2-201ENST00000620112 122 ntBASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM39AQ9NV64 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 RNU6-163P-201ENST00000384396 106 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 HMGN2P3-201ENST00000433603 273 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 HMGN2P5-201ENST00000436882 273 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 RPS29P6-201ENST00000438196 145 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms