Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRDM9Q9NQV7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
PRDM9Q9NQV7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PRDM9Q9NQV7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 RNU6-23P-201ENST00000363283 107 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 CD24P4-201ENST00000382840 243 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 RNU6-950P-201ENST00000384651 107 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 MIR519C-201ENST00000385053 87 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 MIR670-201ENST00000390142 98 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 AL034345.1-201ENST00000407768 123 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 RPS29P28-201ENST00000446439 141 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 RNU6-958P-201ENST00000516995 106 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 AC026333.2-201ENST00000542164 106 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 AC008739.3-201ENST00000603262 127 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 AC069114.2-201ENST00000604699 304 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 U3.45-201ENST00000607547 219 ntBASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
PRDM9Q9NQV7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 RNU6-1229P-201ENST00000364295 107 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 MIR206-201ENST00000384872 86 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 RNA5SP171-201ENST00000391071 115 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 AC093729.1-201ENST00000513074 128 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 SNORA31.10-201ENST00000516482 106 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 SNORA70.18-201ENST00000516696 98 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 MIR4444-1-201ENST00000581696 74 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 MIR4444-2-201ENST00000584390 74 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 MIR4791-201ENST00000607666 84 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 U4atac.1-201ENST00000618345 95 ntBASIC3.34□□□□□ -1.87
PRDM9Q9NQV7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 RNU6-315P-201ENST00000362666 107 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 RNU6-1019P-201ENST00000364424 107 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 SNORD115-27-201ENST00000364430 82 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 U8.16-201ENST00000391279 133 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 AC005786.1-201ENST00000588553 154 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 MIR6075-201ENST00000620782 95 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 AC022149.2-201ENST00000621061 203 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PRDM9Q9NQV7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 RNU6-524P-201ENST00000384270 107 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 Y_RNA.565-201ENST00000384719 101 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 Y_RNA.567-201ENST00000384736 106 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 MIR136-201ENST00000385207 82 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 MIR591-201ENST00000385290 95 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 MIR548G-201ENST00000408442 89 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 RNU6-1190P-201ENST00000410811 104 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 SNORA70.19-201ENST00000516717 90 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 RNU7-35P-201ENST00000517174 62 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 AC022513.1-201ENST00000624512 117 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.32□□□□□ -1.88
PRDM9Q9NQV7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 SNORD115-37-201ENST00000363768 82 ntBASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 Y_RNA.545-201ENST00000384652 105 ntBASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 MIR3922-201ENST00000585192 84 ntBASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
PRDM9Q9NQV7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 MIR34C-201ENST00000384831 77 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 RNU6-913P-201ENST00000390913 95 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 RPL31P63-201ENST00000422565 375 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 snoU13.22-201ENST00000459428 104 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 AC140658.3-201ENST00000567603 271 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 MIR4425-201ENST00000580572 84 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PRDM9Q9NQV7 RNU6-865P-201ENST00000364772 107 ntBASIC3.29□□□□□ -1.88
PRDM9Q9NQV7 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
PRDM9Q9NQV7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
PRDM9Q9NQV7 RNU6-447P-201ENST00000410293 104 ntBASIC3.29□□□□□ -1.88
PRDM9Q9NQV7 RNU6-1118P-201ENST00000410382 104 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms