Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC109327.2-201ENST00000448339 378 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AC011406.1-201ENST00000512440 370 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AC007751.1-201ENST00000529260 376 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AL353149.1-201ENST00000610667 244 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AL359075.3-201ENST00000613288 217 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AC134878.1-201ENST00000619901 243 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-228P-201ENST00000362700 106 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-888P-201ENST00000363010 101 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 Y_RNA.219-201ENST00000364232 113 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 Y_RNA.323-201ENST00000365157 109 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 SNORA64-201ENST00000384674 134 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 MIR515-2-201ENST00000384883 83 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 MIR515-1-201ENST00000384884 83 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 MIR570-201ENST00000384917 97 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 RNU2-48P-201ENST00000410694 191 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 HMGN2P34-201ENST00000437647 269 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 HMGN2P23-201ENST00000456759 269 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 RNU7-94P-201ENST00000459576 63 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 AC073413.2-201ENST00000604332 360 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 MIR494-201ENST00000349529 81 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-820P-201ENST00000384273 107 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 MIR450A2-201ENST00000385022 100 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 SRIP3-201ENST00000413200 219 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 SNRPGP10-201ENST00000432323 225 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
CNTNAP4Q9C0A0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 MIR340-201ENST00000362125 95 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-972P-201ENST00000391208 107 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 RNA5SP136-201ENST00000410906 107 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 TRIAP1P1-201ENST00000427062 225 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 RNU1-131P-201ENST00000458943 161 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 AC023141.11-201ENST00000508864 202 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 MRPS17P9-201ENST00000511924 393 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-970P-201ENST00000516312 107 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 AL355297.2-201ENST00000604792 129 ntBASIC2.92□□□□□ -1.94
CNTNAP4Q9C0A0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 RNU1-23P-201ENST00000363361 144 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 SNORA63.5-201ENST00000363548 123 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-743P-201ENST00000364151 106 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 Y_RNA.544-201ENST00000384650 113 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 MIR489-201ENST00000384923 84 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 RNU1-142P-201ENST00000516682 145 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 AC008507.4-201ENST00000585464 127 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 MALAT1.1-201ENST00000618249 95 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 MIR6079-201ENST00000635807 62 ntBASIC2.91□□□□□ -1.94
CNTNAP4Q9C0A0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 SNORD61-201ENST00000384252 73 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-813P-201ENST00000384691 107 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 FTH1P12-201ENST00000432137 551 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 MTATP8P2-201ENST00000435212 202 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 AC024995.1-201ENST00000523014 93 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 MIR3129-201ENST00000581095 76 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 MIR4781-201ENST00000585250 76 ntBASIC2.9□□□□□ -1.95
CNTNAP4Q9C0A0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 ZNF271P-202ENST00000465539 1970 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 SNORA1-201ENST00000384107 130 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 SNORA26.7-201ENST00000391288 122 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 RPS3AP1-201ENST00000413190 320 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 SNRPGP13-201ENST00000442212 177 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 AC233266.1-201ENST00000454518 96 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 RNU7-128P-201ENST00000517247 62 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 AC242852.1-201ENST00000612151 96 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 AC244015.1-201ENST00000622301 99 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 MIR338-201ENST00000636369 67 ntBASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CNTNAP4Q9C0A0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 MIR221-201ENST00000385135 110 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.593-201ENST00000410292 98 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 AC092427.1-202ENST00000430569 476 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms