Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-3Q9BYR4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.15□□□□□ -2.22
KRTAP4-3Q9BYR4 AC009487.4-201ENST00000624969 3585 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR448-201ENST00000362131 111 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-495P-201ENST00000362995 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU1-18P-201ENST00000363062 164 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA1.2-201ENST00000365189 134 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RNA5SP235-201ENST00000365411 114 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC099336.2-201ENST00000422457 254 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC007919.1-201ENST00000429380 217 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC245517.4-201ENST00000448601 281 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC016717.1-201ENST00000448918 286 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC099560.2-201ENST00000457554 255 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD105B-201ENST00000458770 79 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA59A-201ENST00000459326 152 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RPL23AP42-201ENST00000471152 471 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RPS27P21-201ENST00000486977 252 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC005912.1-201ENST00000495392 255 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU7-53P-201ENST00000516705 60 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR2276-201ENST00000516886 89 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 IGKV2D-36-201ENST00000518643 226 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 IGLV3-17-201ENST00000519099 244 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 NDUFB9P3-201ENST00000521269 501 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4276-201ENST00000584832 70 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC012493.2-201ENST00000595083 291 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 RPL17P51-201ENST00000605218 238 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4791-201ENST00000607666 84 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-3Q9BYR4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 Y_RNA.15-201ENST00000362420 102 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 U8.5-201ENST00000364528 136 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD1A-201ENST00000364968 72 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1039P-201ENST00000383931 107 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-260P-201ENST00000384092 107 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU1-89P-201ENST00000384592 164 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-225P-201ENST00000384613 103 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MT-TC-201ENST00000387405 66 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR300-201ENST00000401138 83 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 HMGN2P30-201ENST00000423237 256 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 HMGN2P21-201ENST00000447764 270 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 BX276092.4-201ENST00000452056 248 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RPS3P1-201ENST00000456781 192 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RN7SL93P-201ENST00000463035 293 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RN7SL601P-201ENST00000471221 293 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-991P-201ENST00000516168 107 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 SCARNA15.2-201ENST00000516409 127 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1256P-201ENST00000516539 103 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AC133485.1-201ENST00000567176 124 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR5680-201ENST00000577577 84 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4500-201ENST00000579472 76 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4753-201ENST00000585119 83 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4762-201ENST00000585261 75 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AC103810.8-201ENST00000607347 118 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR486-1-201ENST00000612171 68 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms