Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CALM2P4-201ENST00000430810 426 ntBASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 RPS29P24-201ENST00000486345 171 ntBASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-240P-201ENST00000516098 97 ntBASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 RNA5SP236-201ENST00000516169 116 ntBASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 SNORD14E-201ENST00000364009 85 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-1107P-201ENST00000364817 104 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 SNORA2.2-201ENST00000365473 135 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 SNORA25B-201ENST00000365507 128 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 MIR27B-201ENST00000385129 97 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 SNORA26.7-201ENST00000391288 122 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 RNA5SP320-201ENST00000516263 124 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 AP002004.2-201ENST00000531656 154 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 MIR8070-201ENST00000616510 88 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 U4.3-201ENST00000621047 82 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.94□□□□□ -1.94
SYNGAP1Q96PV0 SNORD115-3-201ENST00000363100 82 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-160P-201ENST00000384591 107 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 MIR522-201ENST00000385071 87 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 SNORD12C-201ENST00000386307 89 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 MIR548O-201ENST00000408583 114 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNU4-53P-201ENST00000410828 140 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNA5SP136-201ENST00000410906 107 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AL163195.1-201ENST00000496941 348 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 SNORA72.7-201ENST00000516349 94 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 MIR5582-201ENST00000579697 68 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AC087685.1-201ENST00000587507 141 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AC106754.2-201ENST00000623006 233 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 U6.108-201ENST00000637764 58 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-862P-201ENST00000362804 105 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 SNORA63.5-201ENST00000363548 123 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 MIR548A2-201ENST00000384956 97 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 MIR518F-201ENST00000384973 87 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 SRIP3-201ENST00000413200 219 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AL356320.1-201ENST00000429616 163 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AL353689.1-201ENST00000438895 199 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNU7-94P-201ENST00000459576 63 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AC018868.1-201ENST00000491307 315 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-113P-201ENST00000516653 101 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNA5SP480-201ENST00000516840 109 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-56P-201ENST00000516986 93 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.93□□□□□ -1.94
SYNGAP1Q96PV0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-690P-201ENST00000365242 106 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-442P-201ENST00000383968 104 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 MIR570-201ENST00000384917 97 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 FTH1P12-201ENST00000432137 551 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 AC009238.1-201ENST00000442165 424 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 AC009237.6-201ENST00000446969 424 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 AL358944.1-201ENST00000528537 144 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 AC134878.1-201ENST00000619901 243 ntBASIC2.92□□□□□ -1.94
SYNGAP1Q96PV0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-106P-201ENST00000384405 107 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 Y_RNA.549-201ENST00000384657 102 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 MIR759-201ENST00000390224 91 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-554P-201ENST00000410466 106 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 RNU7-25P-201ENST00000516544 62 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.91□□□□□ -1.94
SYNGAP1Q96PV0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 RNA5SP289-201ENST00000362332 137 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 SNORA25.9-201ENST00000365087 128 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 RPL23AP42-201ENST00000471152 471 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 COX6CP6-201ENST00000490840 228 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 RN7SL636P-201ENST00000497504 294 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 SCARNA15-202ENST00000516881 127 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 MIR5197-201ENST00000583721 112 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 MIR376A2-201ENST00000636782 80 ntBASIC2.9□□□□□ -1.95
SYNGAP1Q96PV0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 354.4 ms