Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 RNA5SP127-201ENST00000411051 133 ntBASIC2.57□□□□□ -2
FGD4Q96M96 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.57□□□□□ -2
FGD4Q96M96 RNU6-1211P-201ENST00000459179 105 ntBASIC2.57□□□□□ -2
FGD4Q96M96 SNORA28-201ENST00000606769 126 ntBASIC2.57□□□□□ -2
FGD4Q96M96 AC006441.5-201ENST00000612680 209 ntBASIC2.57□□□□□ -2
FGD4Q96M96 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.57□□□□□ -2
FGD4Q96M96 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
FGD4Q96M96 Y_RNA.71-201ENST00000362892 104 ntBASIC2.56□□□□□ -2
FGD4Q96M96 Y_RNA.127-201ENST00000363386 109 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORA63D-201ENST00000364359 132 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORD50B-201ENST00000364995 70 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORD116-14-201ENST00000383894 92 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORD116-17-201ENST00000383929 92 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORA67.3-201ENST00000384366 140 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORD116-15-201ENST00000384445 92 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORA22C-201ENST00000384614 134 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORD116-19-201ENST00000384729 92 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNRPGP13-201ENST00000442212 177 ntBASIC2.56□□□□□ -2
FGD4Q96M96 SNORA18.4-201ENST00000516440 124 ntBASIC2.56□□□□□ -2
FGD4Q96M96 AC011603.4-201ENST00000611325 277 ntBASIC2.56□□□□□ -2
FGD4Q96M96 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
FGD4Q96M96 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.56□□□□□ -2
FGD4Q96M96 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
FGD4Q96M96 snoU2-30.1-201ENST00000365012 70 ntBASIC2.55□□□□□ -2
FGD4Q96M96 RNU6-442P-201ENST00000383968 104 ntBASIC2.55□□□□□ -2
FGD4Q96M96 RNU6-950P-201ENST00000384651 107 ntBASIC2.55□□□□□ -2
FGD4Q96M96 AL591806.2-201ENST00000433122 173 ntBASIC2.55□□□□□ -2
FGD4Q96M96 Y_RNA.666-201ENST00000516187 112 ntBASIC2.55□□□□□ -2
FGD4Q96M96 SUB1P4-201ENST00000566062 339 ntBASIC2.55□□□□□ -2
FGD4Q96M96 AC092881.1-201ENST00000638218 2733 ntBASIC2.55□□□□□ -2
FGD4Q96M96 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
FGD4Q96M96 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FGD4Q96M96 SNORD14E-201ENST00000364009 85 ntBASIC2.54□□□□□ -2
FGD4Q96M96 RNA5SP205-201ENST00000364653 136 ntBASIC2.54□□□□□ -2
FGD4Q96M96 Y_RNA.336-201ENST00000365307 109 ntBASIC2.54□□□□□ -2
FGD4Q96M96 MIR548A2-201ENST00000384956 97 ntBASIC2.54□□□□□ -2
FGD4Q96M96 SNRPGP14-201ENST00000435400 219 ntBASIC2.54□□□□□ -2
FGD4Q96M96 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.54□□□□□ -2
FGD4Q96M96 MIR6873-201ENST00000622788 63 ntBASIC2.54□□□□□ -2
FGD4Q96M96 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.54□□□□□ -2
FGD4Q96M96 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
FGD4Q96M96 RNU6-1084P-201ENST00000362498 107 ntBASIC2.53□□□□□ -2
FGD4Q96M96 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
FGD4Q96M96 SNORA1-201ENST00000384107 130 ntBASIC2.53□□□□□ -2
FGD4Q96M96 MIR802-201ENST00000390235 94 ntBASIC2.53□□□□□ -2
FGD4Q96M96 MIR891A-201ENST00000401237 79 ntBASIC2.53□□□□□ -2
FGD4Q96M96 AL603914.1-201ENST00000401964 204 ntBASIC2.53□□□□□ -2
FGD4Q96M96 RN7SKP200-201ENST00000410564 320 ntBASIC2.53□□□□□ -2
FGD4Q96M96 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
FGD4Q96M96 HMGN2P32-201ENST00000444648 269 ntBASIC2.53□□□□□ -2
FGD4Q96M96 RNU4-57P-201ENST00000515980 135 ntBASIC2.53□□□□□ -2
FGD4Q96M96 RNU6-693P-201ENST00000516134 107 ntBASIC2.53□□□□□ -2
FGD4Q96M96 RNVU1-2-201ENST00000516326 135 ntBASIC2.53□□□□□ -2
FGD4Q96M96 SNORA31.10-201ENST00000516482 106 ntBASIC2.53□□□□□ -2
FGD4Q96M96 SNORD45.4-201ENST00000516629 73 ntBASIC2.53□□□□□ -2
FGD4Q96M96 AC015712.3-201ENST00000559380 164 ntBASIC2.53□□□□□ -2
FGD4Q96M96 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
FGD4Q96M96 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
FGD4Q96M96 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
FGD4Q96M96 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
FGD4Q96M96 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
FGD4Q96M96 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
FGD4Q96M96 U8.1-201ENST00000362843 134 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 STAG3L5P-204ENST00000443759 179 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 RNU6-1333P-201ENST00000516162 93 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 Y_RNA.692-201ENST00000516627 105 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 RNU6-1270P-201ENST00000517128 108 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 RNU1-104P-201ENST00000517280 175 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FGD4Q96M96 Y_RNA.757-201ENST00000578934 114 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 MIR3129-201ENST00000581095 76 ntBASIC2.52□□□□□ -2.01
FGD4Q96M96 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FGD4Q96M96 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
FGD4Q96M96 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 MIRLET7C-201ENST00000362160 84 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 Y_RNA.52-201ENST00000362760 96 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 Y_RNA.280-201ENST00000364765 112 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 SNORD18B-201ENST00000365659 72 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 MIR520A-201ENST00000384862 85 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 MIR518F-201ENST00000384973 87 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 Y_RNA.686-201ENST00000516548 134 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 RNU6-1234P-201ENST00000516877 103 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 RNU2-60P-201ENST00000517290 128 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 MIR3121-201ENST00000579680 77 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 AC027279.3-201ENST00000625055 122 ntBASIC2.51□□□□□ -2.01
FGD4Q96M96 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.5□□□□□ -2.01
FGD4Q96M96 RNU6-268P-201ENST00000364174 107 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 RNA5SP501-201ENST00000410990 112 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 AL158823.1-201ENST00000418441 478 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.5□□□□□ -2.01
FGD4Q96M96 CYCTP-201ENST00000504253 315 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 SNORA31.25-201ENST00000517242 134 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 IGLV3-17-201ENST00000519099 244 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 U1.36-201ENST00000620684 176 ntBASIC2.5□□□□□ -2.01
FGD4Q96M96 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FGD4Q96M96 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
FGD4Q96M96 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FGD4Q96M96 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms