Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-948P-201ENST00000516374 107 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU7-115P-201ENST00000516433 55 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 POLR3GP1-201ENST00000594073 261 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.76□□□□□ -2.13
SNED1Q8TER0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
SNED1Q8TER0 CENPCP1-201ENST00000533085 2578 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 AC010332.2-201ENST00000613083 1904 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR367-201ENST00000362299 68 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-199P-201ENST00000362954 107 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-271P-201ENST00000363858 105 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 Y_RNA.229-201ENST00000364347 113 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-407P-201ENST00000365280 104 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-728P-201ENST00000365375 104 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-438P-201ENST00000365561 103 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-975P-201ENST00000384296 105 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-1274P-201ENST00000384557 107 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR518A2-201ENST00000384966 87 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR569-201ENST00000385228 96 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR320A-201ENST00000385302 82 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR873-201ENST00000401120 77 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-57P-201ENST00000411348 103 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RPL30P13-201ENST00000418873 348 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.75□□□□□ -2.13
SNED1Q8TER0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.75□□□□□ -2.13
SNED1Q8TER0 HSPE1P13-201ENST00000451143 297 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 AC018868.1-201ENST00000491307 315 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 RNU6-313P-201ENST00000516317 112 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.75□□□□□ -2.13
SNED1Q8TER0 AL391903.3-201ENST00000612158 163 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR548AY-201ENST00000617669 107 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIR6515-201ENST00000619843 57 ntBASIC1.75□□□□□ -2.13
SNED1Q8TER0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SNED1Q8TER0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SNED1Q8TER0 SNORA27.1-201ENST00000362604 124 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORD31B-201ENST00000364977 69 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-418P-201ENST00000384035 107 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORA40-201ENST00000388090 126 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORD37.2-201ENST00000391075 66 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-221P-201ENST00000459541 99 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNA5SP20-201ENST00000515976 84 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORA25.12-201ENST00000516202 82 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-561P-201ENST00000516222 102 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-479P-201ENST00000516348 105 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.74□□□□□ -2.13
SNED1Q8TER0 AC005972.2-201ENST00000604690 348 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AL773524.1-201ENST00000614065 229 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 MIR3658-201ENST00000636291 56 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORD50B-201ENST00000364995 70 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORD116-13-201ENST00000384408 92 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORA22C-201ENST00000384614 134 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 SNORA20-201ENST00000384662 132 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 MIR15B-201ENST00000385045 98 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-1168P-201ENST00000390831 104 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-63P-201ENST00000516690 95 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RNU6-965P-201ENST00000516721 96 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AC084364.2-201ENST00000546924 395 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AP003357.1-201ENST00000604497 148 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AC022202.1-201ENST00000613515 211 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AL365222.1-201ENST00000614661 98 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 AC095038.3-201ENST00000634439 195 ntBASIC1.74□□□□□ -2.13
SNED1Q8TER0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.74□□□□□ -2.13
SNED1Q8TER0 U8.1-201ENST00000362843 134 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 RNU1-23P-201ENST00000363361 144 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 Y_RNA.521-201ENST00000384560 114 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 RNU6-136P-201ENST00000384663 107 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SNED1Q8TER0 HMGN2P18-201ENST00000450680 270 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 RPL23AP54-201ENST00000495129 419 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 RNU7-116P-201ENST00000516940 62 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 AC112693.2-201ENST00000556538 232 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SNED1Q8TER0 MIR6844-201ENST00000637122 62 ntBASIC1.73□□□□□ -2.13
SNED1Q8TER0 AL159152.1-201ENST00000635019 2587 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNU6-546P-201ENST00000383991 107 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNU6-643P-201ENST00000384018 107 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNA5SP511-201ENST00000410487 115 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 Y_RNA.622-201ENST00000411091 108 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 MTND4LP9-201ENST00000427694 174 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNU6-1211P-201ENST00000459179 105 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RPS26P55-201ENST00000471178 356 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNU6-667P-201ENST00000517186 102 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 AC025647.1-201ENST00000517879 253 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 MIR1248-201ENST00000629190 106 ntBASIC1.72□□□□□ -2.13
SNED1Q8TER0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNED1Q8TER0 RNU6-743P-201ENST00000364151 106 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 RNY3P5-201ENST00000384127 102 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 Y_RNA.542-201ENST00000384641 111 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms