Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 FO393413.1-201ENST00000402892 195 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 AC245047.3-201ENST00000429428 127 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 AL606517.2-201ENST00000442855 241 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 S100A11P2-201ENST00000467589 312 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 CKS1BP2-201ENST00000497342 240 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 RNU6-539P-201ENST00000516665 103 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 RNU6-826P-201ENST00000516827 104 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 RNU6-958P-201ENST00000516995 106 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 AC007536.1-201ENST00000533382 349 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 MIR5004-201ENST00000579078 107 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 UCA1.1-201ENST00000620952 75 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SNIP1Q8TAD8 RNU6-1094P-201ENST00000362416 104 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 MIR95-201ENST00000385072 81 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 SNORD17-201ENST00000390930 237 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 MIR548G-201ENST00000408442 89 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 RN7SKP111-201ENST00000410349 271 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 COTL1P1-201ENST00000422309 375 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 MICF-203ENST00000432679 129 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 RNA5SP208-201ENST00000516156 78 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 RNU7-153P-201ENST00000516455 62 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 AL513043.2-201ENST00000573941 143 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 MIR5680-201ENST00000577577 84 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 MIR3199-1-201ENST00000582434 88 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
SNIP1Q8TAD8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 MIR206-201ENST00000384872 86 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RNU6-1190P-201ENST00000410811 104 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 CST2P1-201ENST00000425770 87 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 AC125388.1-201ENST00000459631 156 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RN7SL429P-201ENST00000479090 223 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RN7SL489P-201ENST00000486185 223 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RN7SL327P-201ENST00000488659 223 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RN7SL636P-201ENST00000497504 294 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 AC020891.4-201ENST00000605745 93 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RNU6-90P-201ENST00000606352 106 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 RN7SL853P-201ENST00000617250 223 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 MIR6717-201ENST00000622747 73 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 AC245060.5-201ENST00000610778 3293 ntBASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNIP1Q8TAD8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 RNU6-862P-201ENST00000362804 105 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 RNA5SP261-201ENST00000410536 106 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 CYP2C59P-201ENST00000457790 269 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 AC006386.2-201ENST00000624491 75 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 AC012005.1-201ENST00000624575 75 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 U6.98-201ENST00000637157 84 ntBASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
SNIP1Q8TAD8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 MIRLET7C-201ENST00000362160 84 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 Y_RNA.340-201ENST00000365330 92 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 STAG3L5P-204ENST00000443759 179 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 RNU7-67P-201ENST00000459003 62 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 SNORA25.13-201ENST00000516395 103 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 RNU7-53P-201ENST00000516705 60 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 AC008011.1-201ENST00000545989 227 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 DNAJC19P9-201ENST00000555084 351 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 MIR4791-201ENST00000607666 84 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 AL162274.2-201ENST00000614406 332 ntBASIC3.34□□□□□ -1.87
SNIP1Q8TAD8 AL356274.2-201ENST00000624379 3752 ntBASIC3.34□□□□□ -1.88
SNIP1Q8TAD8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 AL450471.1-201ENST00000447509 127 ntBASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 SPINT5P-201ENST00000448174 155 ntBASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 SNORA48.11-201ENST00000517015 89 ntBASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 AC027279.3-201ENST00000625055 122 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms