Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 Y_RNA.430-201ENST00000384081 110 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 RNU6-616P-201ENST00000384353 107 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 MIR512-1-201ENST00000384913 84 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 RNU7-80P-201ENST00000459562 61 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 AC004223.1-201ENST00000479840 271 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 SNORA18.7-201ENST00000516910 131 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 MIR4513-201ENST00000581077 86 ntBASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD1Q8NHV4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 RNU6-438P-201ENST00000365561 103 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 POLR2J4-204ENST00000418424 324 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 AC060773.1-201ENST00000421698 310 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 RNU6-523P-201ENST00000516304 54 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 RNU6-1258P-201ENST00000516911 111 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 RNU6-341P-201ENST00000516973 96 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 AP000867.2-201ENST00000532468 320 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 MIR6079-201ENST00000635807 62 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 U6.108-201ENST00000637764 58 ntBASIC3.29□□□□□ -1.88
NEDD1Q8NHV4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 RNU1-112P-201ENST00000364401 164 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 RNU6-524P-201ENST00000384270 107 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 AL138827.1-201ENST00000402666 306 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 AL035398.1-201ENST00000430869 322 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 RNU7-99P-201ENST00000516271 62 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 RNU6-856P-201ENST00000516959 98 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 MIR6852-201ENST00000621699 66 ntBASIC3.28□□□□□ -1.88
NEDD1Q8NHV4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
NEDD1Q8NHV4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 RNU6-442P-201ENST00000383968 104 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 HMGN2P34-201ENST00000437647 269 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 AC090255.1-201ENST00000495779 349 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 AC114801.3-201ENST00000510231 177 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 RNU6-965P-201ENST00000516721 96 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 AL358944.1-201ENST00000528537 144 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 MIR4778-201ENST00000577635 80 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.27□□□□□ -1.89
NEDD1Q8NHV4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 MIR342-201ENST00000362212 99 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 SNORA1B-201ENST00000362535 133 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 RNU6-1313P-201ENST00000362622 102 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 Y_RNA.247-201ENST00000364500 92 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 RNA5SP21-201ENST00000410917 96 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 SNX2P2-201ENST00000424553 323 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 RPS29P6-201ENST00000438196 145 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 AC069257.2-201ENST00000441819 155 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 AC108938.1-201ENST00000451204 136 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 MIR4319-201ENST00000577285 85 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 MIR4439-201ENST00000583746 80 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 AC103810.7-201ENST00000607821 91 ntBASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NEDD1Q8NHV4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 AC062016.1-201ENST00000355719 319 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 Y_RNA.171-201ENST00000363760 102 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 MIR9-1-201ENST00000385198 89 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 RNA5SP467-201ENST00000391274 118 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 MIR1253-201ENST00000408273 105 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 Y_RNA.609-201ENST00000410669 89 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 AL022718.1-201ENST00000412004 84 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 Y_RNA.714-201ENST00000517065 90 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 AC103810.1-201ENST00000579873 453 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 MIR4762-201ENST00000585261 75 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 MIR376B-201ENST00000614515 100 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD1Q8NHV4 RNU6-590P-201ENST00000365039 107 ntBASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 Y_RNA.494-201ENST00000384432 111 ntBASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 RNA5SP184-201ENST00000411071 108 ntBASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 AC090844.1-201ENST00000422019 156 ntBASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 AC244505.4-201ENST00000434905 287 ntBASIC3.24□□□□□ -1.89
NEDD1Q8NHV4 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms