Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU1-101P-201ENST00000391171 127 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 RNU6-1077P-201ENST00000410506 102 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 RNU2-48P-201ENST00000410694 191 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 AL022718.1-201ENST00000412004 84 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 COTL1P1-201ENST00000422309 375 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4DQ86TL0 RNU2-11P-201ENST00000459191 187 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 RPL23AP63-201ENST00000498752 471 ntBASIC2.67□□□□□ -1.98
ATG4DQ86TL0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
ATG4DQ86TL0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATG4DQ86TL0 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 U8.5-201ENST00000364528 136 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 SNORD45B-201ENST00000364617 72 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 RNY1P4-201ENST00000384595 115 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 SNORA80E-201ENST00000384744 137 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 MIR634-201ENST00000385208 97 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 AC087499.4-201ENST00000448505 178 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.66□□□□□ -1.98
ATG4DQ86TL0 Y_RNA.705-201ENST00000516862 110 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.66□□□□□ -1.98
ATG4DQ86TL0 MIR4668-201ENST00000582284 70 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
ATG4DQ86TL0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
ATG4DQ86TL0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATG4DQ86TL0 GABRG2-229ENST00000641017 3628 ntBASIC2.65□□□□□ -1.98
ATG4DQ86TL0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
ATG4DQ86TL0 SNORA9.2-201ENST00000365361 133 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 RNU6-652P-201ENST00000365488 107 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AL627390.1-201ENST00000396055 340 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 FO393413.1-201ENST00000402892 195 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 RNU6-887P-201ENST00000410660 100 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.611-201ENST00000410682 108 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.620-201ENST00000411009 88 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4DQ86TL0 RNU7-45P-201ENST00000459460 63 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AC139453.2-201ENST00000487255 133 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AL163195.1-201ENST00000496941 348 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 CKS1BP2-201ENST00000497342 240 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 SNORA31.26-201ENST00000517250 137 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AC019288.1-201ENST00000557918 224 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 MIR4506-201ENST00000584693 77 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4DQ86TL0 AC021613.1-201ENST00000623880 111 ntBASIC2.65□□□□□ -1.99
ATG4DQ86TL0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
ATG4DQ86TL0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ATG4DQ86TL0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ATG4DQ86TL0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.171-201ENST00000363760 102 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RNU6-776P-201ENST00000364403 104 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RNU6-1022P-201ENST00000365049 104 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.426-201ENST00000384068 113 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 SNORA27-201ENST00000384323 126 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RNU6-616P-201ENST00000384353 107 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RN7SKP123-201ENST00000410732 291 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 AC073261.1-201ENST00000429409 121 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 AL035398.1-201ENST00000430869 322 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 SCARNA3-201ENST00000517097 143 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RNU6-711P-201ENST00000517255 106 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 MIR5739-201ENST00000619803 80 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 MIR7515-201ENST00000637837 67 ntBASIC2.64□□□□□ -1.99
ATG4DQ86TL0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4DQ86TL0 AC092881.1-201ENST00000638218 2733 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ATG4DQ86TL0 AC096644.4-201ENST00000563417 2912 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4DQ86TL0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.4-201ENST00000362333 112 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 SNORD114-6-201ENST00000364393 72 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 RNU6-1201P-201ENST00000384227 107 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 SNORD38C-201ENST00000384381 69 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 MIR889-201ENST00000401280 79 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 RNU4-69P-201ENST00000410677 143 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 POLR2J4-204ENST00000418424 324 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 AC104332.2-201ENST00000429959 156 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 RPS29P6-201ENST00000438196 145 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 MIR6852-201ENST00000621699 66 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 CTSLP2-204ENST00000629029 392 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 MIR4662A-201ENST00000637499 67 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 AC006160.2-201ENST00000637708 154 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4DQ86TL0 AC093010.3-201ENST00000570269 15214 ntBASIC2.63□□□□□ -1.99
ATG4DQ86TL0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms