Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCRAQ6ISU1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTCRAQ6ISU1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
PTCRAQ6ISU1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 U8.15-201ENST00000390947 134 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 AL606517.2-201ENST00000442855 241 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 STAG3L5P-204ENST00000443759 179 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 RNU7-170P-201ENST00000459303 61 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 SNORA70.14-201ENST00000516205 110 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 RNU7-53P-201ENST00000516705 60 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 RNU6-1258P-201ENST00000516911 111 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 UBL5P2-201ENST00000583788 219 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 ELOCP29-201ENST00000588193 334 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 MIR8054-201ENST00000620877 86 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 AC096644.4-201ENST00000563417 2912 ntBASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
PTCRAQ6ISU1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 MIRLET7C-201ENST00000362160 84 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 SNORA22.1-201ENST00000362701 134 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 RNA5SP493-201ENST00000364115 91 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 RNA5SP42-201ENST00000364278 115 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 RNU6-776P-201ENST00000364403 104 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 RNU6-1022P-201ENST00000365049 104 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 SNORA54-201ENST00000384281 123 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 RNY1P4-201ENST00000384595 115 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 AL138878.1-201ENST00000405131 347 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 AC022018.1-201ENST00000430685 241 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 RN7SL93P-201ENST00000463035 293 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 AC108729.3-201ENST00000513484 108 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 MIR548AE2-201ENST00000583456 67 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 MIR6841-201ENST00000637129 72 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 AC006160.2-201ENST00000637708 154 ntBASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCRAQ6ISU1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 RNU6-833P-201ENST00000363486 107 ntBASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 RNU7-181P-201ENST00000517234 74 ntBASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 DNAJC19P9-201ENST00000555084 351 ntBASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCRAQ6ISU1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 SNORA7.4-201ENST00000384249 137 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 Y_RNA.470-201ENST00000384307 117 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 RNA5SP109-201ENST00000391010 116 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 RNU1-101P-201ENST00000391171 127 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 Y_RNA.607-201ENST00000410597 98 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 Y_RNA.611-201ENST00000410682 108 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 AC069257.2-201ENST00000441819 155 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 RNU6-1116P-201ENST00000517269 99 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 MIR4319-201ENST00000577285 85 ntBASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCRAQ6ISU1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 RNU6-509P-201ENST00000363519 107 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 MIR1262-201ENST00000408276 93 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 RNA5SP184-201ENST00000411071 108 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 RNA5SP508-201ENST00000411327 119 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 RNU7-45P-201ENST00000459460 63 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 MIR3616-201ENST00000584070 92 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 AC245060.5-201ENST00000610778 3293 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTCRAQ6ISU1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 Y_RNA.4-201ENST00000362333 112 ntBASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 Y_RNA.370-201ENST00000365589 108 ntBASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 RNU6-220P-201ENST00000390919 107 ntBASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 MIR3169-201ENST00000578032 83 ntBASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 MIR548BB-201ENST00000626714 66 ntBASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.34□□□□□ -1.87
PTCRAQ6ISU1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTCRAQ6ISU1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
PTCRAQ6ISU1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.34□□□□□ -1.88
PTCRAQ6ISU1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms