Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU1-61P-201ENST00000516107 151 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.9□□□□□ -1.79
VARS2Q5ST30 AC067747.1-201ENST00000608026 250 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
VARS2Q5ST30 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
VARS2Q5ST30 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VARS2Q5ST30 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VARS2Q5ST30 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VARS2Q5ST30 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VARS2Q5ST30 MIR1262-201ENST00000408276 93 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 AC110620.1-201ENST00000416042 228 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 AC092628.1-201ENST00000436250 252 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 AP000873.1-201ENST00000463987 400 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 MIR4511-201ENST00000582784 87 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
VARS2Q5ST30 AC103706.3-201ENST00000636297 85 ntBASIC3.89□□□□□ -1.79
VARS2Q5ST30 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VARS2Q5ST30 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VARS2Q5ST30 Y_RNA.36-201ENST00000362602 112 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 RNA5SP50-201ENST00000363731 107 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 CD24P4-201ENST00000382840 243 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 AC245047.3-201ENST00000429428 127 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 AC104027.1-201ENST00000521887 300 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 AC002076.2-201ENST00000617362 122 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
VARS2Q5ST30 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VARS2Q5ST30 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VARS2Q5ST30 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VARS2Q5ST30 Y_RNA.12-201ENST00000362393 112 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 AC015818.7-201ENST00000428754 109 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 RNU7-170P-201ENST00000459303 61 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 SNORA70.18-201ENST00000516696 98 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 SNORA31.21-201ENST00000517180 77 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 MIR8058-201ENST00000615737 89 ntBASIC3.87□□□□□ -1.79
VARS2Q5ST30 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VARS2Q5ST30 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
VARS2Q5ST30 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
VARS2Q5ST30 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.87□□□□□ -1.79
VARS2Q5ST30 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VARS2Q5ST30 AC007336.1-201ENST00000576365 3828 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 MIR942-201ENST00000401111 86 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 RNU4-83P-201ENST00000410863 133 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 AL161788.1-201ENST00000441805 169 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 AL606517.2-201ENST00000442855 241 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
VARS2Q5ST30 YWHAEP2-201ENST00000580066 112 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 YWHAEP3-201ENST00000582767 121 ntBASIC3.86□□□□□ -1.79
VARS2Q5ST30 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.86□□□□□ -1.79
VARS2Q5ST30 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VARS2Q5ST30 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VARS2Q5ST30 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VARS2Q5ST30 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VARS2Q5ST30 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VARS2Q5ST30 MIR490-201ENST00000384865 128 ntBASIC3.85□□□□□ -1.79
VARS2Q5ST30 CST2P1-201ENST00000425770 87 ntBASIC3.85□□□□□ -1.79
VARS2Q5ST30 HMGN1P33-201ENST00000432945 451 ntBASIC3.85□□□□□ -1.79
VARS2Q5ST30 MIR486-1-201ENST00000612171 68 ntBASIC3.85□□□□□ -1.79
VARS2Q5ST30 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.85□□□□□ -1.79
VARS2Q5ST30 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
VARS2Q5ST30 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VARS2Q5ST30 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
VARS2Q5ST30 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VARS2Q5ST30 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
VARS2Q5ST30 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.84□□□□□ -1.79
VARS2Q5ST30 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VARS2Q5ST30 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
VARS2Q5ST30 SNORA38.1-201ENST00000364172 131 ntBASIC3.84□□□□□ -1.79
VARS2Q5ST30 RNU6-1083P-201ENST00000384022 107 ntBASIC3.84□□□□□ -1.79
VARS2Q5ST30 RNA5SP120-201ENST00000410900 112 ntBASIC3.84□□□□□ -1.79
VARS2Q5ST30 STAG3L5P-204ENST00000443759 179 ntBASIC3.84□□□□□ -1.79
VARS2Q5ST30 ATP5J2P3-201ENST00000451550 258 ntBASIC3.84□□□□□ -1.79
VARS2Q5ST30 MIR8065-201ENST00000620577 100 ntBASIC3.84□□□□□ -1.79
VARS2Q5ST30 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.84□□□□□ -1.79
VARS2Q5ST30 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.84□□□□□ -1.79
VARS2Q5ST30 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
VARS2Q5ST30 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VARS2Q5ST30 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VARS2Q5ST30 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VARS2Q5ST30 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VARS2Q5ST30 MIR423-201ENST00000362201 94 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 RNU6-330P-201ENST00000363015 107 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 Y_RNA.236-201ENST00000364427 111 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 RNU6-160P-201ENST00000384591 107 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 Z98941.1-201ENST00000407764 100 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 RPS29P11-201ENST00000496507 171 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 RN7SL636P-201ENST00000497504 294 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 MIR3064-201ENST00000581130 66 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 AC104996.3-201ENST00000590718 94 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 AC243994.1-201ENST00000618627 109 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 MIR8057-201ENST00000620957 69 ntBASIC3.83□□□□□ -1.8
VARS2Q5ST30 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.83□□□□□ -1.8
VARS2Q5ST30 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VARS2Q5ST30 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VARS2Q5ST30 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VARS2Q5ST30 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VARS2Q5ST30 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms