Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC004057.1-201ENST00000485827 348 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 AC007224.1-201ENST00000564410 144 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 AC025627.2-201ENST00000576220 160 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 MIR6867-201ENST00000610636 67 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCBP3Q53F19 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NCBP3Q53F19 AL161722.3-201ENST00000605789 2983 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCBP3Q53F19 RNU6-461P-201ENST00000364195 107 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 MIR1251-201ENST00000408552 70 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 RNA5SP317-201ENST00000410176 116 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 RNA5SP311-201ENST00000411290 116 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 RPS27P21-201ENST00000486977 252 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 RPS26P15-201ENST00000488067 348 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 RNA5SP315-201ENST00000516340 116 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 SCARNA16.3-201ENST00000516595 184 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 SNORA18.5-201ENST00000516616 101 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 RNA5SP312-201ENST00000517068 116 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 SNORA74.3-201ENST00000517108 154 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 MIR4500-201ENST00000579472 76 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 MIR6868-201ENST00000611215 58 ntBASIC5.27□□□□□ -1.57
NCBP3Q53F19 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.27□□□□□ -1.57
NCBP3Q53F19 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NCBP3Q53F19 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCBP3Q53F19 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCBP3Q53F19 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NCBP3Q53F19 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NCBP3Q53F19 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NCBP3Q53F19 RNA5SP130-201ENST00000364431 114 ntBASIC5.26□□□□□ -1.57
NCBP3Q53F19 RNY1P2-201ENST00000364820 117 ntBASIC5.26□□□□□ -1.57
NCBP3Q53F19 MTND4LP19-201ENST00000403051 166 ntBASIC5.26□□□□□ -1.57
NCBP3Q53F19 RNU6-850P-201ENST00000516934 103 ntBASIC5.26□□□□□ -1.57
NCBP3Q53F19 AC141846.1-201ENST00000568348 142 ntBASIC5.26□□□□□ -1.57
NCBP3Q53F19 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NCBP3Q53F19 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NCBP3Q53F19 RNU6-800P-201ENST00000384473 103 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 MIR199A2-201ENST00000385289 110 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 SNORD77.2-201ENST00000391045 68 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 RNU6-587P-201ENST00000391282 106 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 RNU4-37P-201ENST00000410214 84 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 RNA5SP306-201ENST00000411087 107 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.25□□□□□ -1.57
NCBP3Q53F19 MIR2116-201ENST00000517221 80 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 MIR4536-1-201ENST00000583537 88 ntBASIC5.25□□□□□ -1.57
NCBP3Q53F19 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NCBP3Q53F19 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NCBP3Q53F19 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NCBP3Q53F19 RNU5F-1-201ENST00000362507 117 ntBASIC5.24□□□□□ -1.57
NCBP3Q53F19 SNORA38-201ENST00000363946 132 ntBASIC5.24□□□□□ -1.57
NCBP3Q53F19 RNU1-13P-201ENST00000384499 162 ntBASIC5.24□□□□□ -1.57
NCBP3Q53F19 BX510359.4-201ENST00000423750 193 ntBASIC5.24□□□□□ -1.57
NCBP3Q53F19 SNRPGP12-201ENST00000449481 213 ntBASIC5.24□□□□□ -1.57
NCBP3Q53F19 AC008133.2-201ENST00000624540 351 ntBASIC5.24□□□□□ -1.57
NCBP3Q53F19 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NCBP3Q53F19 IPO8P1-201ENST00000455509 3109 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 RNA5SP399-201ENST00000364003 117 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 AL359837.1-201ENST00000381357 287 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 SNORA72.6-201ENST00000384520 129 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 MIR660-201ENST00000385235 97 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 RN7SL594P-201ENST00000470590 287 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 MIR2114-201ENST00000516645 80 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 AC021506.2-201ENST00000612354 169 ntBASIC5.23□□□□□ -1.57
NCBP3Q53F19 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NCBP3Q53F19 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NCBP3Q53F19 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
NCBP3Q53F19 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.22□□□□□ -1.57
NCBP3Q53F19 RNU1-70P-201ENST00000362618 164 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 RNA5SP124-201ENST00000362739 110 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 RNU6-540P-201ENST00000384622 101 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 SNORD38B-201ENST00000384690 67 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.22□□□□□ -1.57
NCBP3Q53F19 AC022202.1-201ENST00000613515 211 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 AL513423.1-201ENST00000621695 132 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 SNORD38B-202ENST00000625943 69 ntBASIC5.22□□□□□ -1.57
NCBP3Q53F19 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NCBP3Q53F19 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NCBP3Q53F19 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NCBP3Q53F19 SNORD35B-201ENST00000363660 87 ntBASIC5.21□□□□□ -1.58
NCBP3Q53F19 Y_RNA.596-201ENST00000410462 109 ntBASIC5.21□□□□□ -1.58
NCBP3Q53F19 AC092427.1-202ENST00000430569 476 ntBASIC5.21□□□□□ -1.58
NCBP3Q53F19 SCARNA14-201ENST00000516903 136 ntBASIC5.21□□□□□ -1.58
NCBP3Q53F19 U6.111-201ENST00000636093 83 ntBASIC5.21□□□□□ -1.58
NCBP3Q53F19 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NCBP3Q53F19 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NCBP3Q53F19 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC5.21□□□□□ -1.58
NCBP3Q53F19 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NCBP3Q53F19 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.21□□□□□ -1.58
NCBP3Q53F19 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC5.2□□□□□ -1.58
NCBP3Q53F19 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NCBP3Q53F19 MIR23B-201ENST00000384832 97 ntBASIC5.2□□□□□ -1.58
NCBP3Q53F19 RNU6-628P-201ENST00000410675 107 ntBASIC5.2□□□□□ -1.58
NCBP3Q53F19 RNU2-7P-201ENST00000410794 178 ntBASIC5.2□□□□□ -1.58
NCBP3Q53F19 MIR548AO-201ENST00000579992 96 ntBASIC5.2□□□□□ -1.58
NCBP3Q53F19 SCARNA15.3-201ENST00000626315 122 ntBASIC5.2□□□□□ -1.58
NCBP3Q53F19 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NCBP3Q53F19 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NCBP3Q53F19 AL023284.1-201ENST00000403956 276 ntBASIC5.19□□□□□ -1.58
NCBP3Q53F19 HSPE1P24-201ENST00000450782 238 ntBASIC5.19□□□□□ -1.58
NCBP3Q53F19 snoU13.22-201ENST00000459428 104 ntBASIC5.19□□□□□ -1.58
NCBP3Q53F19 RNU1-45P-201ENST00000517191 141 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms