Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NDUFA4P2-201ENST00000489989 244 ntBASIC1.82□□□□□ -2.12
LTBQ06643 SNORD77.4-201ENST00000516158 81 ntBASIC1.82□□□□□ -2.12
LTBQ06643 AC112693.2-201ENST00000556538 232 ntBASIC1.82□□□□□ -2.12
LTBQ06643 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
LTBQ06643 MIR6840-201ENST00000611937 71 ntBASIC1.82□□□□□ -2.12
LTBQ06643 AC091895.1-201ENST00000624494 256 ntBASIC1.82□□□□□ -2.12
LTBQ06643 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.82□□□□□ -2.12
LTBQ06643 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LTBQ06643 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LTBQ06643 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
LTBQ06643 Y_RNA.91-201ENST00000363042 107 ntBASIC1.81□□□□□ -2.12
LTBQ06643 Y_RNA.253-201ENST00000364562 112 ntBASIC1.81□□□□□ -2.12
LTBQ06643 SNORD37.2-201ENST00000391075 66 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU6-588P-201ENST00000410281 105 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU2-55P-201ENST00000411146 174 ntBASIC1.81□□□□□ -2.12
LTBQ06643 BX510359.4-201ENST00000423750 193 ntBASIC1.81□□□□□ -2.12
LTBQ06643 CST2P1-201ENST00000425770 87 ntBASIC1.81□□□□□ -2.12
LTBQ06643 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
LTBQ06643 AL606517.2-201ENST00000442855 241 ntBASIC1.81□□□□□ -2.12
LTBQ06643 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
LTBQ06643 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RPS26P45-201ENST00000471748 340 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU6-1299P-201ENST00000516316 100 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU6-197P-201ENST00000516680 100 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU7-149P-201ENST00000516739 59 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU6-341P-201ENST00000516973 96 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU2-19P-201ENST00000517288 84 ntBASIC1.81□□□□□ -2.12
LTBQ06643 AC026271.5-201ENST00000577873 130 ntBASIC1.81□□□□□ -2.12
LTBQ06643 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
LTBQ06643 MIR378D2-201ENST00000580636 98 ntBASIC1.81□□□□□ -2.12
LTBQ06643 MIR5694-201ENST00000581190 76 ntBASIC1.81□□□□□ -2.12
LTBQ06643 AC120024.3-201ENST00000603167 156 ntBASIC1.81□□□□□ -2.12
LTBQ06643 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.81□□□□□ -2.12
LTBQ06643 MIR6844-201ENST00000637122 62 ntBASIC1.81□□□□□ -2.12
LTBQ06643 AC010332.2-201ENST00000613083 1904 ntBASIC1.81□□□□□ -2.12
LTBQ06643 RNU6-199P-201ENST00000362954 107 ntBASIC1.8□□□□□ -2.12
LTBQ06643 RNU6-1082P-201ENST00000364574 107 ntBASIC1.8□□□□□ -2.12
LTBQ06643 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
LTBQ06643 Y_RNA.432-201ENST00000384087 111 ntBASIC1.8□□□□□ -2.12
LTBQ06643 Y_RNA.486-201ENST00000384398 107 ntBASIC1.8□□□□□ -2.12
LTBQ06643 SNORA12.1-201ENST00000390873 148 ntBASIC1.8□□□□□ -2.12
LTBQ06643 HMGN2P39-201ENST00000398005 273 ntBASIC1.8□□□□□ -2.12
LTBQ06643 MIR513C-201ENST00000401352 84 ntBASIC1.8□□□□□ -2.12
LTBQ06643 RPL30P13-201ENST00000418873 348 ntBASIC1.8□□□□□ -2.12
LTBQ06643 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.8□□□□□ -2.12
LTBQ06643 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.8□□□□□ -2.12
LTBQ06643 AC055731.1-201ENST00000474387 401 ntBASIC1.8□□□□□ -2.12
LTBQ06643 AC092991.1-201ENST00000477176 376 ntBASIC1.8□□□□□ -2.12
LTBQ06643 HMGN1P7-201ENST00000491722 313 ntBASIC1.8□□□□□ -2.12
LTBQ06643 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
LTBQ06643 JPX_2.1-201ENST00000614161 69 ntBASIC1.8□□□□□ -2.12
LTBQ06643 Pinc.1-201ENST00000616452 154 ntBASIC1.8□□□□□ -2.12
LTBQ06643 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.8□□□□□ -2.12
LTBQ06643 RNU1-58P-201ENST00000362413 163 ntBASIC1.79□□□□□ -2.12
LTBQ06643 SNORA1B-201ENST00000362535 133 ntBASIC1.79□□□□□ -2.12
LTBQ06643 RNU6-978P-201ENST00000364371 103 ntBASIC1.79□□□□□ -2.12
LTBQ06643 Y_RNA.634-201ENST00000364811 113 ntBASIC1.79□□□□□ -2.12
LTBQ06643 Y_RNA.291-201ENST00000364886 113 ntBASIC1.79□□□□□ -2.12
LTBQ06643 Y_RNA.542-201ENST00000384641 111 ntBASIC1.79□□□□□ -2.12
LTBQ06643 RNU6-959P-201ENST00000384671 107 ntBASIC1.79□□□□□ -2.12
LTBQ06643 RNU6-460P-201ENST00000391158 108 ntBASIC1.79□□□□□ -2.12
LTBQ06643 SNORA40.18-201ENST00000391200 128 ntBASIC1.79□□□□□ -2.12
LTBQ06643 SNORA79-201ENST00000408376 140 ntBASIC1.79□□□□□ -2.12
LTBQ06643 MTND4LP9-201ENST00000427694 174 ntBASIC1.79□□□□□ -2.12
LTBQ06643 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.79□□□□□ -2.12
LTBQ06643 OR9P1P-201ENST00000496431 281 ntBASIC1.79□□□□□ -2.12
LTBQ06643 MIR3646-201ENST00000578301 84 ntBASIC1.79□□□□□ -2.12
LTBQ06643 AC022217.4-201ENST00000604389 163 ntBASIC1.79□□□□□ -2.12
LTBQ06643 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
LTBQ06643 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
LTBQ06643 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LTBQ06643 Y_RNA.251-201ENST00000364551 99 ntBASIC1.78□□□□□ -2.12
LTBQ06643 RNU6-597P-201ENST00000365620 102 ntBASIC1.78□□□□□ -2.12
LTBQ06643 Y_RNA.420-201ENST00000384043 110 ntBASIC1.78□□□□□ -2.12
LTBQ06643 MIR597-201ENST00000384968 97 ntBASIC1.78□□□□□ -2.12
LTBQ06643 MIR29C-201ENST00000385231 88 ntBASIC1.78□□□□□ -2.12
LTBQ06643 SNORD72-201ENST00000390994 80 ntBASIC1.78□□□□□ -2.12
LTBQ06643 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.78□□□□□ -2.12
LTBQ06643 RNU2-70P-201ENST00000410718 179 ntBASIC1.78□□□□□ -2.12
LTBQ06643 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
LTBQ06643 SNRPGP10-201ENST00000432323 225 ntBASIC1.78□□□□□ -2.12
LTBQ06643 AC023449.1-201ENST00000454464 154 ntBASIC1.78□□□□□ -2.12
LTBQ06643 AL049830.1-201ENST00000468034 425 ntBASIC1.78□□□□□ -2.12
LTBQ06643 AC024995.1-201ENST00000523014 93 ntBASIC1.78□□□□□ -2.12
LTBQ06643 AL160236.1-201ENST00000556317 195 ntBASIC1.78□□□□□ -2.12
LTBQ06643 MIR4448-201ENST00000584360 86 ntBASIC1.78□□□□□ -2.12
LTBQ06643 AL591926.4-201ENST00000616895 298 ntBASIC1.78□□□□□ -2.12
LTBQ06643 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
LTBQ06643 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LTBQ06643 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
LTBQ06643 AC008555.8-201ENST00000623602 2168 ntBASIC1.77□□□□□ -2.13
LTBQ06643 RNU6-457P-201ENST00000363999 107 ntBASIC1.77□□□□□ -2.13
LTBQ06643 RNU6-1138P-201ENST00000365359 106 ntBASIC1.77□□□□□ -2.13
LTBQ06643 MIR515-2-201ENST00000384883 83 ntBASIC1.77□□□□□ -2.13
LTBQ06643 MIR515-1-201ENST00000384884 83 ntBASIC1.77□□□□□ -2.13
LTBQ06643 SNORA40-201ENST00000388090 126 ntBASIC1.77□□□□□ -2.13
LTBQ06643 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
LTBQ06643 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
LTBQ06643 AL356379.1-201ENST00000414105 126 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms